Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0025
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 65 6e-11
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 41 9e-04
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 35 0.057
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 35 0.057
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 30 2.1
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 28 6.5
Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 28 8.6
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/93 (38%), Positives = 51/93 (54%)
Frame = +2
Query: 230 CGCIYVC*AVQTFIHTNNWMMIIAFILSMGTLIALIVKRRDSPANLYLLAAFTVIQAYTI 409
C IY + + W++ + S+ +IAL V R+ P N LLAAFT +QA T+
Sbjct: 92 CAAIYNIPNSNQLLQKHAWIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQAVTM 151
Query: 410 GVVVSYYNTMVVLQALALTFAVVFSLTLYTLNS 508
G VV+ + VVL+A +T VV SL YTL +
Sbjct: 152 GCVVTLFEAKVVLEAAVITGLVVASLFAYTLQN 184
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 141 VMNAEREIRLAFIRKVYGLLTVQLLATVSIAA 236
V A R IR+AF+RKV G++ QLL T+ I A
Sbjct: 62 VGKANRMIRIAFLRKVLGIVGFQLLFTIGICA 93
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +2
Query: 260 QTFIHTNNWMMIIAFILSMGTLIALIV---KRRDSPANLYLLAAFTVIQAYTIGVVVSYY 430
Q ++ N W+ IA I+ + IAL RR P N+ LL FT+ A V + Y
Sbjct: 60 QDWVKNNFWVYFIAIIVFLVVAIALSCCGNLRRQFPVNIILLTIFTLSAAVMTMFVTACY 119
Query: 431 NTMVVLQALALTFAVVFSLTLYTLNS 508
N VL L +T S+ ++++ +
Sbjct: 120 NVQSVLICLCITTVCSGSVIIFSMKT 145
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 99 GKESVEDDFAYRNNVMNAEREIRLAFIRKVYGLLTVQLLATVSIAAVFMFVEPYR 263
G + +DD + N+ + + +R AF+RKV+ L+T+ T + + M EP++
Sbjct: 6 GATTAQDDPDGKYNLHFSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQ 60
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 269 IHTNNWMMIIAFILSMGTLIALIV---KRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTM 439
+ N+ + + ++++ T ++L+ RR P NL + FT+ + V+ ++++
Sbjct: 115 VRRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDAN 174
Query: 440 VVLQALALTFAVVFSLTL 493
VVL ALA+ FS+ +
Sbjct: 175 VVLLALAICIGCTFSIVI 192
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 269 IHTNNWMMIIAFILSMGTLIALIV---KRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTM 439
+ N+ + + ++++ T ++L+ RR P NL + FT+ + V+ ++++
Sbjct: 115 VRRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDAN 174
Query: 440 VVLQALALTFAVVFSLTL 493
VVL ALA+ FS+ +
Sbjct: 175 VVLLALAICIGCTFSIVI 192
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 332 LIVKRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTL 502
+I+ RD+ N LAA ++ VV Y++M A+TFA VF+ ++++
Sbjct: 419 MILVPRDTKGNKQSLAALDIMVPGVFLNVVLKYSSMYDTNLFAITFAAVFASLVFSV 475
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 498 VYSVRENTTANVKARACNTTMVL*YDTTTPIVYAWITVNAARRYRLAGESRRFT 337
VY+V N T NV A AC ++ V +V W T N +++ + G T
Sbjct: 564 VYAVTANPTGNVLATACKSSHV-----EHSVVMLWSTSNWSKKSEIIGHQLTVT 612
>Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical
protein F14E5.4 protein.
Length = 408
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 213 LATVSIAAVFMFVEPYRHLYTPII 284
L++ S MF +P RHLY P++
Sbjct: 104 LSSASTVGAAMFEDPSRHLYVPVL 127
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 213 GAALSGDRRLSV*RQDGSPFQHSLHCC 133
G AL+G + + + PFQH HCC
Sbjct: 485 GYALNGHMDALLSQLEALPFQHHFHCC 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,565,264
Number of Sequences: 27780
Number of extensions: 400814
Number of successful extensions: 1049
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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