BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0024
(476 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 23 7.2
AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related ... 23 7.2
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 22 9.6
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 22 9.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 22 9.6
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 22.6 bits (46), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 325 GYRXQTTTLIISYF*RFMSSWSESIIELRSQHV 227
GYR LI +F+SSW ++ R +HV
Sbjct: 141 GYRFTEKDLIH----KFVSSWWSEYLDARPEHV 169
>AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related 1
protein protein.
Length = 178
Score = 22.6 bits (46), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 325 GYRXQTTTLIISYF*RFMSSWSESIIELRSQHV 227
GYR LI +F+SSW ++ R +HV
Sbjct: 141 GYRFTEKDLIH----KFVSSWWSEYLDARPEHV 169
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 158 KMCRTSREHRRCSEV 202
K CR +++ RCSE+
Sbjct: 185 KACRYAKQPERCSEI 199
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 158 KMCRTSREHRRCSEV 202
K CR +++ RCSE+
Sbjct: 185 KACRYAKQPERCSEI 199
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 22.2 bits (45), Expect = 9.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 281 SEVRDDKRGGLXPVPV 328
SEV D GGL PVP+
Sbjct: 622 SEVNDFFYGGLEPVPL 637
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,610
Number of Sequences: 2352
Number of extensions: 6913
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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