Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0022
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    89   2e-18
Z49867-3|CAA90029.2|  433|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U25175-1|AAC36130.1|  433|Caenorhabditis elegans GATA-factor pro...    30   1.9  
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    29   4.4  
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U88180-1|AAB42294.1|  203|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U64836-5|AAG24057.1|  119|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    28   7.6  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    28   7.6  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 41/88 (46%), Positives = 53/88 (60%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  ++V  +Q+ I  PT   V EQ+ AI  +V  +I+     G N+I  QE W MPFAFC
Sbjct: 71  PRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFC 130

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELAI 508
           TRE+ PW EF ES   GPTT  L +LA+
Sbjct: 131 TRERLPWTEFAESVYTGPTTQFLSKLAV 158



 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = +1

Query: 508 QYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNESKLTXWKVT 687
           ++ +VI+S ILERDE+  D++WNTAVVIS TG VIG+ RKNHI RVG FNES     + T
Sbjct: 159 KHDIVIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTY-YMEST 217

Query: 688 XAIPVF 705
              PVF
Sbjct: 218 LGHPVF 223


>Z49867-3|CAA90029.2|  433|Caenorhabditis elegans Hypothetical
           protein C33D3.1 protein.
          Length = 433

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = +1

Query: 160 KNPRSLQLRRLTSTSPHTLSRPRTSRPDPREFEGRNSSAFHRGAHRSSSQRA 315
           K   +LQ R+  S S  + S P TSR   R+FE  +SS     A RSS++RA
Sbjct: 277 KKEGALQTRKRKSKSGDS-STPSTSRARERKFERASSST--EKAQRSSNRRA 325


>U25175-1|AAC36130.1|  433|Caenorhabditis elegans GATA-factor
           protein.
          Length = 433

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = +1

Query: 160 KNPRSLQLRRLTSTSPHTLSRPRTSRPDPREFEGRNSSAFHRGAHRSSSQRA 315
           K   +LQ R+  S S  + S P TSR   R+FE  +SS     A RSS++RA
Sbjct: 277 KKEGALQTRKRKSKSGDS-STPSTSRARERKFERASSST--EKAQRSSNRRA 325


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 623 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIAY*WRVPEGGSWSARLQLIR 456
           +C P+TF ++   T +       F+++  IE+T I IA   +  EG    A+  +IR
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTIIR 131


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 320 KAIFNKVKKIIDVTGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 454
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 320 KAIFNKVKKIIDVTGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 454
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 484 DPPSGTRHQYAMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 624
           D P+G   +   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 211 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHTGKVR 259


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 484 DPPSGTRHQYAMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 624
           D P+G   +   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 283 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHSGKVR 331


>U88180-1|AAB42294.1|  203|Caenorhabditis elegans Hypothetical
           protein T27A3.4 protein.
          Length = 203

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +1

Query: 184 RRLTSTSPHTLSRPRT---SRPDPREFEGRNSSAFHRGAHRSSSQ 309
           R  +S    + SRPRT   SR   R   G   S+  R  HRSSS+
Sbjct: 125 RSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSK 169


>U64836-5|AAG24057.1|  119|Caenorhabditis elegans Hypothetical
           protein F10G2.2 protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 341 KKIIDVT-GQEGVNIICFQELWNMPFAFCTREKQ 439
           +++ID T G+EG+  +CF    N P  F   E Q
Sbjct: 78  EQVIDNTLGEEGILCLCFTNFCNTPITFDEFESQ 111


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 415  EGHVPQLLETDDVNTLLAGXIDDFLDFIEN 326
            EGHVP ++ET    T+     DD  D  EN
Sbjct: 3091 EGHVPSVIETKTTTTVTREFYDDDQDEHEN 3120


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 415  EGHVPQLLETDDVNTLLAGXIDDFLDFIEN 326
            EGHVP ++ET    T+     DD  D  EN
Sbjct: 3091 EGHVPSVIETKTTTTVTREFYDDDQDEHEN 3120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,630,252
Number of Sequences: 27780
Number of extensions: 314725
Number of successful extensions: 929
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)