Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0022
         (715 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/58 (20%), Positives = 26/58 (44%)
 Frame = +2

Query: 239 PTPENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMP 412
           P PENLK  ++ + +   + +  N         +K+ +D   + GV++     ++  P
Sbjct: 21  PLPENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSP 78


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/58 (20%), Positives = 26/58 (44%)
 Frame = +2

Query: 239 PTPENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMP 412
           P PENLK  ++ + +   + +  N         +K+ +D   + GV++     ++  P
Sbjct: 21  PLPENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIYPSP 78


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 307 DWTIGGHRDGML 272
           +W +G H DG L
Sbjct: 518 EWKVGNHEDGYL 529


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 307 DWTIGGHRDGML 272
           +W +G H DG L
Sbjct: 433 EWKVGNHEDGYL 444


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 307 DWTIGGHRDGML 272
           +W +G H DG L
Sbjct: 752 EWKVGNHEDGYL 763


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,884
Number of Sequences: 438
Number of extensions: 3991
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)