Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0020
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein pr... 33 0.99
BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligas... 33 0.99
BC108705-1|AAI08706.1| 244|Homo sapiens UBE3B protein protein. 33 0.99
BC068221-1|AAH68221.1| 244|Homo sapiens UBE3B protein protein. 33 0.99
BC051266-1|AAH51266.1| 244|Homo sapiens UBE3B protein protein. 33 0.99
BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein. 33 0.99
AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein. 33 0.99
AY358738-1|AAQ89098.1| 285|Homo sapiens EPA6 protein. 30 7.0
BC013051-1|AAH13051.1| 686|Homo sapiens LIM domain kinase 2 pro... 30 9.3
AC002073-3|AAB54055.1| 733|Homo sapiens Lim kinase protein. 30 9.3
>BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein
protein.
Length = 1068
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligase
E3B protein.
Length = 1068
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>BC108705-1|AAI08706.1| 244|Homo sapiens UBE3B protein protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>BC068221-1|AAH68221.1| 244|Homo sapiens UBE3B protein protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>BC051266-1|AAH51266.1| 244|Homo sapiens UBE3B protein protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein.
Length = 1026
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.
Length = 1068
Score = 33.1 bits (72), Expect = 0.99
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 38 FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 202
F++ + K + LCI KI ++ +FR E F+ +C I+++M ++ K+
Sbjct: 61 FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115
>AY358738-1|AAQ89098.1| 285|Homo sapiens EPA6 protein.
Length = 285
Score = 30.3 bits (65), Expect = 7.0
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +2
Query: 89 KIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDE 196
KIY EM R NSI C E N Y SDE
Sbjct: 99 KIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDE 134
>BC013051-1|AAH13051.1| 686|Homo sapiens LIM domain kinase 2
protein.
Length = 686
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 265 TNKYDINMIIEHLNTKDWNQEKLIAFLDLLKKKLSDI 375
T KYD + +HLN ++W E+L D ++++S++
Sbjct: 596 TIKYDPKELRKHLNLEEWILEQLTRLYDCQEEEISEL 632
>AC002073-3|AAB54055.1| 733|Homo sapiens Lim kinase protein.
Length = 733
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 265 TNKYDINMIIEHLNTKDWNQEKLIAFLDLLKKKLSDI 375
T KYD + +HLN ++W E+L D ++++S++
Sbjct: 596 TIKYDPKELRKHLNLEEWILEQLTRLYDCQEEEISEL 632
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,283,769
Number of Sequences: 237096
Number of extensions: 1508252
Number of successful extensions: 2075
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2075
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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