Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0020
         (705 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g13750.1 68417.m02134 expressed protein                             34   0.080
At1g27100.1 68414.m03303 expressed protein  contains Pfam profil...    29   4.0  
At4g10430.3 68417.m01715 expressed protein                             28   5.2  
At4g10430.2 68417.m01713 expressed protein                             28   5.2  
At4g10430.1 68417.m01714 expressed protein                             28   5.2  
At2g22810.1 68415.m02707 1-aminocyclopropane-1-carboxylate synth...    28   5.2  
At2g19800.1 68415.m02313 expressed protein similar to myo-inosit...    28   6.9  

>At4g13750.1 68417.m02134 expressed protein
          Length = 2137

 Score = 34.3 bits (75), Expect = 0.080
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 271  KYDINMIIEHLNTKDWNQEKLIAFLDLLKK 360
            KYDIN++   L  KDW   +L+  L LL K
Sbjct: 1319 KYDINLLSPDLTVKDWESPELVDLLSLLHK 1348


>At1g27100.1 68414.m03303 expressed protein  contains Pfam profile:
           PF04601 protein of unknown function (DUF569
          Length = 519

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 449 LFLGAANLKLVSTLSCN**QHYKF*WXSXYXGFMILIKKWC 571
           L LG    K+  T S N    ++  W     GF + +K WC
Sbjct: 71  LLLGMTGEKVTQTASFNKLMDWQTQWEPERDGFQVKLKSWC 111


>At4g10430.3 68417.m01715 expressed protein
          Length = 347

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 346 DLLKKKLSDIVXMRIYHHNCSYGEVITSFDWLLK 447
           ++L+   SDI    +YHH C+    + S  W +K
Sbjct: 174 NILRANGSDIRPWWLYHHYCAMAMALVSLTWEIK 207


>At4g10430.2 68417.m01713 expressed protein
          Length = 271

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 346 DLLKKKLSDIVXMRIYHHNCSYGEVITSFDWLLK 447
           ++L+   SDI    +YHH C+    + S  W +K
Sbjct: 98  NILRANGSDIRPWWLYHHYCAMAMALVSLTWEIK 131


>At4g10430.1 68417.m01714 expressed protein
          Length = 347

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 346 DLLKKKLSDIVXMRIYHHNCSYGEVITSFDWLLK 447
           ++L+   SDI    +YHH C+    + S  W +K
Sbjct: 174 NILRANGSDIRPWWLYHHYCAMAMALVSLTWEIK 207


>At2g22810.1 68415.m02707 1-aminocyclopropane-1-carboxylate synthase
           4 /  ACC synthase 4  (ACS4) identical to gi:940370
           [GB:U23481]
          Length = 474

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +2

Query: 68  SN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKIS--EIVENNVIQ 232
           SN L      TE++I+F  I   ++  ++ +EI +     S E IS  EI++NN ++
Sbjct: 201 SNPLGTTTTQTELNILFDFITKNKNIHLVSDEIYSGTVFNSSEFISVMEILKNNQLE 257


>At2g19800.1 68415.m02313 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 317

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 116 FRKINSIEHFDIICNEIINNMYTRSDEKISEIVENNVIQTAK 241
           + K+N +E     C E++NN+   SD  + E    +++QTA+
Sbjct: 93  YGKLNKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAE 134


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,134,789
Number of Sequences: 28952
Number of extensions: 238397
Number of successful extensions: 467
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)