Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0019
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    26   1.7  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   9.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.0  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 476 WSKATTDYRKKLQLFLERSEK 538
           W K +   R+KL+L L+RS+K
Sbjct: 356 WYKFSISMRRKLRLLLQRSQK 376


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 400 DITADIILSGDKKNIAHGALFLQDNLVKSDYG 495
           DI    +LS  +KN+    +F+QDN  K   G
Sbjct: 131 DILDTHLLSHARKNLPRSWMFMQDNDSKHTSG 162


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -1

Query: 320 KSFARAWTLTSLPSRSLNLNLAAGSSPCFARP 225
           K +   + + +LP    ++  + G  PCF  P
Sbjct: 394 KEYGTDFDIPALPPSRFDVAASGGVGPCFGEP 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,209
Number of Sequences: 2352
Number of extensions: 16013
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)