Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0018
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    27   0.11 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.3  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.3  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 282 FIQCFRYFSFYKRRCFFQIIVVQTLHFHNHEKQWVIALHF*MKLSKTQFNRYILV 118
           FIQ F   +F+       ++ + +  FH +E    I L F  + S   FN Y++V
Sbjct: 30  FIQKFYAVAFFLALSIGVVVSIYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIV 84


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 318 FFIIMLENKLFSCYYLYCC 374
           FF   L + +F+  Y+YCC
Sbjct: 145 FFAQGLTSPIFNLVYVYCC 163


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 492 PWQCPWLCTPGCPFSIVSN 548
           P +CP +  P C +S VSN
Sbjct: 30  PPRCPPIYEPSCQYSPVSN 48


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +2

Query: 461 YRISLWLCTFALAVSLALHSW 523
           + I ++LC  +L   + +H W
Sbjct: 274 FNIEMFLCNMSLLTVIPIHVW 294


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +3

Query: 447 MKSKCTGSACGSAHLPWQCPWL 512
           M +   G++  + H  WQ  WL
Sbjct: 346 MANAAPGNSASNRHSAWQSHWL 367


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 73  IAYHINDLNCDPFNSYKYIS 132
           I Y  +D NC  +N+  Y+S
Sbjct: 45  ITYPPSDWNCPQYNAPPYMS 64


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 70 DCRRKYHSDNFKIA 29
          DCR K+H+  + +A
Sbjct: 30 DCRYKFHNSRWMVA 43


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 70 DCRRKYHSDNFKIA 29
          DCR K+H+  + +A
Sbjct: 30 DCRYKFHNSRWMVA 43


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 73  IAYHINDLNCDPFNSYKYIS 132
           I Y  +D NC  +N+  Y+S
Sbjct: 36  ITYPPSDWNCPQYNAPPYMS 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,148
Number of Sequences: 336
Number of extensions: 3335
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)