Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0018
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003212-1|AAO24967.1|  527|Drosophila melanogaster RE18250p pro...    76   5e-14
AF132157-1|AAD34745.1|  527|Drosophila melanogaster unknown prot...    76   5e-14
AE014297-3631|AAF56340.1|  527|Drosophila melanogaster CG5807-PA...    76   5e-14
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly...    30   3.4  
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro...    30   3.4  

>BT003212-1|AAO24967.1|  527|Drosophila melanogaster RE18250p
           protein.
          Length = 527

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = +2

Query: 287 DDEEADLREQIFHNNVREQXXXXXXXXXXXXXXXXXXEKFRRRDSEDYFTADEDEVKVYR 466
           ++E  DL+ Q+FHN VRE                    +FRRRD +D ++ DEDEV VYR
Sbjct: 6   EEEVTDLKLQLFHNTVREHIIFLLLIILLYSSSYVVVSRFRRRDRDDLYSNDEDEVLVYR 65

Query: 467 ISLWLCTFALAVSLALHSWLPV 532
           IS WLCTF LAV+      LPV
Sbjct: 66  ISFWLCTFTLAVAEGAAMLLPV 87



 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/42 (64%), Positives = 28/42 (66%)
 Frame = +1

Query: 556 LILYPNSYYVKWLNSSLIQGLWNHXXXXXXXXXXXXXPFAYL 681
           L+LYPNSYYVKWLNSSLIQGLWNH             PF YL
Sbjct: 95  LLLYPNSYYVKWLNSSLIQGLWNHVFLFSNLSLFIFLPFVYL 136


>AF132157-1|AAD34745.1|  527|Drosophila melanogaster unknown
           protein.
          Length = 527

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = +2

Query: 287 DDEEADLREQIFHNNVREQXXXXXXXXXXXXXXXXXXEKFRRRDSEDYFTADEDEVKVYR 466
           ++E  DL+ Q+FHN VRE                    +FRRRD +D ++ DEDEV VYR
Sbjct: 6   EEEVTDLKLQLFHNTVREHIIFLLLIILLYSSSYVVVSRFRRRDRDDLYSNDEDEVLVYR 65

Query: 467 ISLWLCTFALAVSLALHSWLPV 532
           IS WLCTF LAV+      LPV
Sbjct: 66  ISFWLCTFTLAVAEGAAMLLPV 87



 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/42 (64%), Positives = 28/42 (66%)
 Frame = +1

Query: 556 LILYPNSYYVKWLNSSLIQGLWNHXXXXXXXXXXXXXPFAYL 681
           L+LYPNSYYVKWLNSSLIQGLWNH             PF YL
Sbjct: 95  LLLYPNSYYVKWLNSSLIQGLWNHVFLFSNLSLFIFLPFVYL 136


>AE014297-3631|AAF56340.1|  527|Drosophila melanogaster CG5807-PA
           protein.
          Length = 527

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = +2

Query: 287 DDEEADLREQIFHNNVREQXXXXXXXXXXXXXXXXXXEKFRRRDSEDYFTADEDEVKVYR 466
           ++E  DL+ Q+FHN VRE                    +FRRRD +D ++ DEDEV VYR
Sbjct: 6   EEEVTDLKLQLFHNTVREHIIFLLLIILLYSSSYVVVSRFRRRDRDDLYSNDEDEVLVYR 65

Query: 467 ISLWLCTFALAVSLALHSWLPV 532
           IS WLCTF LAV+      LPV
Sbjct: 66  ISFWLCTFTLAVAEGAAMLLPV 87



 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/42 (64%), Positives = 28/42 (66%)
 Frame = +1

Query: 556 LILYPNSYYVKWLNSSLIQGLWNHXXXXXXXXXXXXXPFAYL 681
           L+LYPNSYYVKWLNSSLIQGLWNH             PF YL
Sbjct: 95  LLLYPNSYYVKWLNSSLIQGLWNHVFLFSNLSLFIFLPFVYL 136


>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
            polyprotein protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 94   LNCDPFNSYKYISIELCF-TKFHLKM*CDDPLFLMIVKMKCLYNDDLKETSSFIKRKIPK 270
            +NC   +S K    E+ F TK + ++  D  L L+  ++ C +N+D  E    +KR I +
Sbjct: 1171 INCHVHSSLKLSPFEVMFGTKMYTRVE-DRLLELLQEEVVCQFNEDRYEMRQLVKRNIEQ 1229

Query: 271  A 273
            A
Sbjct: 1230 A 1230


>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 94   LNCDPFNSYKYISIELCF-TKFHLKM*CDDPLFLMIVKMKCLYNDDLKETSSFIKRKIPK 270
            +NC   +S K    E+ F TK + ++  D  L L+  ++ C +N+D  E    +KR I +
Sbjct: 864  INCHVHSSLKLSPFEVMFGTKMYTRVE-DRLLELLQEEVVCQFNEDRYEMRQLVKRNIEQ 922

Query: 271  A 273
            A
Sbjct: 923  A 923


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,715,657
Number of Sequences: 53049
Number of extensions: 547696
Number of successful extensions: 1089
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)