Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0017
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    28   0.23 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    28   0.31 
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   8.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.7  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 283 SEDGQDRGGVPHPQRADE*--LHRRHQGGSRRQDGDPXGKTRGLHQR 417
           ++ G  + GV  PQ++ +    HR+HQ    +Q+G    +  G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 KTRGLHQRAA-LPSQGSS*GR*EDQVDPGTADRGSVQGHQDKM 519
           +TR + +R   LP +G+  G       PGT DR S+Q  +D+M
Sbjct: 2   ETRSMRKRTTRLPEEGAPTG-----AGPGTGDRASIQRLEDEM 39


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 160 TPTGSASITSYARPPFDISWQRISVDLVSTSMAST 56
           TP    S+  +ARP  +++   +S+   +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 13/71 (18%), Positives = 32/71 (45%)
 Frame = +2

Query: 455 EKTRLTLEQQTAEVYKAIKIR*PQLPTSGDENLKKMIERLREHEXQVSQGPRRQPGEVPA 634
           ++ R   +QQ  +  +  +   PQL     +  +   ++ ++ + Q  QG R  P ++  
Sbjct: 245 QRHRQPQQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQ 304

Query: 635 ARERPSQEKLQ 667
            R++   ++ Q
Sbjct: 305 QRQQQQHQQQQ 315


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 198 PSVEEIQEKLIAAEERRR 251
           P +EE++ + IAA ER R
Sbjct: 315 PVIEELRNECIAARERMR 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,760
Number of Sequences: 2352
Number of extensions: 9417
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)