Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0016
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr... 51 8e-07
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh... 51 8e-07
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p... 51 8e-07
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho... 46 2e-05
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho... 46 2e-05
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh... 46 2e-05
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p... 46 2e-05
Z79602-2|CAB01889.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical p... 29 3.6
Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical p... 29 3.6
U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical pr... 29 4.8
>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical
protein F19H8.1 protein.
Length = 1229
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L HW AY+++N +FA V N + +D +W+HDYHLML I Q ++
Sbjct: 411 LRAHWCAYVRVNYQFAIDAVR-----NSRPQD------FIWIHDYHLML-VGMIMQSLDQ 458
Query: 434 DEIKCKLAFFLHIPF-PPWDIF 496
++ FFLHIPF PP + F
Sbjct: 459 ---HLEVGFFLHIPFQPPGEFF 477
Score = 34.3 bits (75), Expect = 0.096
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 144 KIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMPD 242
K+ P+ + ++ YY G NG WP H++P+
Sbjct: 367 KLNPVVVQEDDYNVYYGGISNGLLWPALHNLPE 399
>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1229
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L HW AY+++N +FA V N + +D +W+HDYHLML I Q ++
Sbjct: 411 LRAHWCAYVRVNYQFAIDAVR-----NSRPQD------FIWIHDYHLML-VGMIMQSLDQ 458
Query: 434 DEIKCKLAFFLHIPF-PPWDIF 496
++ FFLHIPF PP + F
Sbjct: 459 ---HLEVGFFLHIPFQPPGEFF 477
Score = 34.3 bits (75), Expect = 0.096
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 144 KIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMPD 242
K+ P+ + ++ YY G NG WP H++P+
Sbjct: 367 KLNPVVVQEDDYNVYYGGISNGLLWPALHNLPE 399
>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1230
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L HW AY+++N +FA V N + +D +W+HDYHLML I Q ++
Sbjct: 411 LRAHWCAYVRVNYQFAIDAVR-----NSRPQD------FIWIHDYHLML-VGMIMQSLDQ 458
Query: 434 DEIKCKLAFFLHIPF-PPWDIF 496
++ FFLHIPF PP + F
Sbjct: 459 ---HLEVGFFLHIPFQPPGEFF 477
Score = 34.3 bits (75), Expect = 0.096
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 144 KIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMPD 242
K+ P+ + ++ YY G NG WP H++P+
Sbjct: 367 KLNPVVVQEDDYNVYYGGISNGLLWPALHNLPE 399
>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform b protein.
Length = 1294
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L + W AY+++N FA ++A N + +D +W+HDYHLML +R
Sbjct: 451 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 496
Query: 434 DEIKCKLAFFLHIPFPP 484
E + FF+HIPF P
Sbjct: 497 -ESSLDIGFFIHIPFQP 512
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 78 PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
P ++ ESD + T S ++ P+ +++YY G NG WP H++P
Sbjct: 383 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 438
>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
6-phosphate synthaseprotein 1, isoform a protein.
Length = 1331
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L + W AY+++N FA ++A N + +D +W+HDYHLML +R
Sbjct: 488 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 533
Query: 434 DEIKCKLAFFLHIPFPP 484
E + FF+HIPF P
Sbjct: 534 -ESSLDIGFFIHIPFQP 549
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 78 PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
P ++ ESD + T S ++ P+ +++YY G NG WP H++P
Sbjct: 420 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 475
>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
trehalose 6-phosphatesynthase protein.
Length = 1331
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L + W AY+++N FA ++A N + +D +W+HDYHLML +R
Sbjct: 488 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 533
Query: 434 DEIKCKLAFFLHIPFPP 484
E + FF+HIPF P
Sbjct: 534 -ESSLDIGFFIHIPFQP 549
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 78 PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
P ++ ESD + T S ++ P+ +++YY G NG WP H++P
Sbjct: 420 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 475
>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1331
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +2
Query: 254 LADHWKAYIKINEEFAEKTVHALHLLNKQKKDKNGSPPIVWVHDYHLMLAANWIRQRAEE 433
L + W AY+++N FA ++A N + +D +W+HDYHLML +R
Sbjct: 488 LREQWCAYVRVNYLFA---INAAR--NSRAQD------FIWIHDYHLMLCGQIMRSL--- 533
Query: 434 DEIKCKLAFFLHIPFPP 484
E + FF+HIPF P
Sbjct: 534 -ESSLDIGFFIHIPFQP 549
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 78 PNEKIPESDPN--DKTPTAGLRSEKIVPIRAEPKLFDSYYNGCCNGTFWPLFHSMP 239
P ++ ESD + T S ++ P+ +++YY G NG WP H++P
Sbjct: 420 PKQQAVESDMSLLSVLNTYNKHSYQLNPVVVNQDDYNTYYGGISNGLLWPALHNLP 475
>Z79602-2|CAB01889.1| 380|Caenorhabditis elegans Hypothetical
protein K09E9.2 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 463 SAHTVSTVGYF*TVPGSDEVLQGILGCDMVGFHIEDYCLNFIDCCQRNLGCRVDRKNLLV 642
++HTV+ V + + PG + L G + D G + Y + + L RVD+ +
Sbjct: 241 ASHTVNHVSFGKSFPGKNYPLDGKVNTDNRGGIMYQYYVKVVPTRYDYLDGRVDQSH--- 297
Query: 643 ELGXSHHLRETAYR-SELPYREISYQLGP 726
+ + H ++ +R S LP + Y+ P
Sbjct: 298 QFSVTTHKKDLGFRQSGLPGFFLQYEFSP 326
>Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical
protein C35C5.10b protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -1
Query: 445 FNLIFFSSLSYPISRQHQMVVVNPHDRWTSIFVFLLFVQQMESVDCLLSKLLVY 284
++LIF + L+Y + + + ++NP T++ + LL ++ C L +L++Y
Sbjct: 99 YSLIFGAELAYKMISRTGIFLLNPCHVTTTMQLMLLTMEGTSKKACFLFRLMLY 152
>Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical
protein C35C5.10a protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -1
Query: 445 FNLIFFSSLSYPISRQHQMVVVNPHDRWTSIFVFLLFVQQMESVDCLLSKLLVY 284
++LIF + L+Y + + + ++NP T++ + LL ++ C L +L++Y
Sbjct: 75 YSLIFGAELAYKMISRTGIFLLNPCHVTTTMQLMLLTMEGTSKKACFLFRLMLY 128
>U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical
protein K09F5.6 protein.
Length = 802
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 223 NGQNVPLQHPL**LSKS--LGSARMGTIFSERRPA--VGVLSLGSDSGIFSLGSSRWMPG 56
+G NVP PL +S SA + FSE + + G +GS + + G+ R PG
Sbjct: 722 SGINVPPPQPLVSREQSPYQRSAIKLSSFSENKGSGIYGTSGIGSGNNVQWGGAQRAAPG 781
Query: 55 HPTQLPW--PRITTG 17
P QL W P T G
Sbjct: 782 QPGQLLWNPPGATNG 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,441,204
Number of Sequences: 27780
Number of extensions: 444389
Number of successful extensions: 1213
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -