Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0013
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p pro...   156   4e-38
AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA ...   156   4e-38
AE014298-1993|AAS65336.2|  171|Drosophila melanogaster CG33238-P...    30   3.5  
AE014298-1988|AAS65331.1|  171|Drosophila melanogaster CG33243-P...    30   3.5  

>AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p
           protein.
          Length = 198

 Score =  156 bits (378), Expect = 4e-38
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +3

Query: 270 NAMLLVCTLLFTLTHINADSD-EGSISKIGTSVGHTMNIYYCYSCGYKKVFEDYAGIIQQ 446
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G++ +
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGE 67

Query: 447 KYPEISVIGANYDPPGFNMYLHELLVLGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLEN 626
           KYP+I V G NYDPPG N YL +++   K+++I+ ++S V+ F +L    P+WWS    N
Sbjct: 68  KYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQAN 127

Query: 627 KLYACMMMFFLANMIEGQLISSGSF 701
           K+YACMM+FFL NM+E QLISSG+F
Sbjct: 128 KIYACMMIFFLGNMLEAQLISSGAF 152



 Score = 33.1 bits (72), Expect = 0.49
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 713 LNNIPLWSKIXTGRIPXP 766
           LN++P+WSK+ TGR P P
Sbjct: 156 LNDVPVWSKLQTGRFPSP 173


>AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA
           protein.
          Length = 198

 Score =  156 bits (378), Expect = 4e-38
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +3

Query: 270 NAMLLVCTLLFTLTHINADSD-EGSISKIGTSVGHTMNIYYCYSCGYKKVFEDYAGIIQQ 446
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G++ +
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGE 67

Query: 447 KYPEISVIGANYDPPGFNMYLHELLVLGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLEN 626
           KYP+I V G NYDPPG N YL +++   K+++I+ ++S V+ F +L    P+WWS    N
Sbjct: 68  KYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQAN 127

Query: 627 KLYACMMMFFLANMIEGQLISSGSF 701
           K+YACMM+FFL NM+E QLISSG+F
Sbjct: 128 KIYACMMIFFLGNMLEAQLISSGAF 152



 Score = 33.1 bits (72), Expect = 0.49
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 713 LNNIPLWSKIXTGRIPXP 766
           LN++P+WSK+ TGR P P
Sbjct: 156 LNDVPVWSKLQTGRFPSP 173


>AE014298-1993|AAS65336.2|  171|Drosophila melanogaster CG33238-PA
           protein.
          Length = 171

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = -2

Query: 726 GMLFKRYLKSSQRILAVLQSYLLKRTSSCMHTACFQ 619
           GM+  RY++S + ++A+ + YL     SC + +C++
Sbjct: 72  GMIHARYIRSERGLIAMHRKYLRGDFGSCPNISCYR 107


>AE014298-1988|AAS65331.1|  171|Drosophila melanogaster CG33243-PA
           protein.
          Length = 171

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = -2

Query: 726 GMLFKRYLKSSQRILAVLQSYLLKRTSSCMHTACFQ 619
           GM+  RY++S + ++A+ + YL     SC + +C++
Sbjct: 72  GMIHARYIRSERGLIAMHRKYLRGDFGSCPNISCYR 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,312,708
Number of Sequences: 53049
Number of extensions: 807178
Number of successful extensions: 1918
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)