Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0013
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   2.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 540 VIMCILSGVNIFAWLNKPQPAWWSW 614
           VI  +L  + IF  +   +PAWW W
Sbjct: 10  VIAAVLLTILIF--VTSHRPAWWFW 32


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 500 VKTRWVIVSSNDRNLWVFLLYNSCIVF 420
           VKTR +  + N+     F +Y +CI++
Sbjct: 693 VKTRKIPENFNESKFIGFTMYTTCIIW 719


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 500 VKTRWVIVSSNDRNLWVFLLYNSCIVF 420
           VKTR +  + N+     F +Y +CI++
Sbjct: 783 VKTRKIPENFNESKFIGFTMYTTCIIW 809


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 426 YAGIIQQKYPEISVIGANYD 485
           Y G+  +KYP+   +G  +D
Sbjct: 627 YCGLRDRKYPDARAMGYPFD 646


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,855
Number of Sequences: 438
Number of extensions: 5545
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)