Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0012
         (876 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2PE16 Cluster: CG13516-PA; n=1; Drosophila melanogaste...    36   1.0  
UniRef50_Q172M2 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  

>UniRef50_Q2PE16 Cluster: CG13516-PA; n=1; Drosophila
           melanogaster|Rep: CG13516-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 168

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 23/86 (26%), Positives = 29/86 (33%)
 Frame = +1

Query: 256 PPPAGFVAPEAPPRTTVITSPQAXXXXXXXXXXXXXXXXCQTCNKTVVTRVDYVPNNRTH 435
           PPP   V   AP   TV+ +                   C  C     TR+ +  N+RTH
Sbjct: 66  PPPVVVVEQPAPQPPTVVPTDTLHLGPNRSRVL------CPACGANKTTRMTHTANSRTH 119

Query: 436 XXXXXXXXXXXXXXXXFVPYCMRSLK 513
                           FVPYCM S +
Sbjct: 120 MVAGLLCLVGFCCCACFVPYCMNSCR 145



 Score = 33.1 bits (72), Expect = 9.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 510 KTANHYCPQCKAFVGAFTP 566
           +T NHYC +C  F+GA+ P
Sbjct: 145 RTGNHYCRKCNTFLGAYNP 163


>UniRef50_Q172M2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 136

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
 Frame = +1

Query: 253 SPPPAGFVAPEAPPRTTVITS--PQAXXXXXXXXXXXXXXXXCQTCNKTVVTRVDYVPNN 426
           +P P  +  PE P  +T   +  P                  C +C  T+VTR++Y    
Sbjct: 31  NPTPTAYPHPEQPAASTSFNTSQPTTVIISSPNVGPDPTTMVCPSCRATIVTRLEYETTT 90

Query: 427 RTHXXXXXXXXXXXXXXXXFVPYCMRSLK 513
           +TH                 +PYC  S +
Sbjct: 91  KTHICAALLCLFICWPCVC-IPYCSTSCR 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,728,588
Number of Sequences: 1657284
Number of extensions: 14963940
Number of successful extensions: 40692
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 37740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40525
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)