Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0012
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    27   0.99 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   2.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.3  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   5.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   5.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.3  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   9.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   9.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 788 KKXXGPXPXXGXVLVFKPTYPFKIF 714
           KK   P P    +L+F PT  F+IF
Sbjct: 824 KKSKKPIPKSNALLIFSPTNRFRIF 848


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +2

Query: 173 WKIKWDYRHHEQSVPNPAPPPSYFGNNHHRLPVSLLPKHLRVLQ**HHPKHRQDH 337
           W   W+      ++ N  PPP Y     + L  S+ P +    Q    P HR  H
Sbjct: 359 WPHYWNRFTQSTAMHNQPPPPPYQPPQPYSLMASVAPSYGLPQQQNQCPIHRIQH 413


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 483  FRSVLHEIVKTANHYCPQCK 542
            FRS LH   + ++  CP CK
Sbjct: 956  FRSYLHRFNRASSSRCPACK 975


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 215 PNPAPPPSYFGN-NHHRLPVSLLPKHLRVLQ**HHPKHRQDHQES 346
           P PA PP +  + +HH+LP    P H       HHP+ +   Q S
Sbjct: 86  PMPAQPPHHHQHPHHHQLPHH--PHHQ------HHPQQQPSPQTS 122


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 215 PNPAPPPSYFGN-NHHRLPVSLLPKHLRVLQ**HHPKHRQDHQES 346
           P PA PP +  + +HH+LP    P H       HHP+ +   Q S
Sbjct: 86  PMPAQPPHHHQHPHHHQLPHH--PHHQ------HHPQQQPSPQTS 122


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -2

Query: 329  AGAWGDVITVVRGGASGATKPAGGGDYCQSTKEAELDSVPIVHGGGN 189
            AG  G ++T V GG  G +    G     +T  +        H G N
Sbjct: 937  AGNNGVIMTGVGGGGGGGSAGGAGSTISNNTNSSSSSGKKSSHSGTN 983


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 239 TKEAELDSVPIVHGGGNPILFSIVASIVS 153
           T  A  D+VP++    N I+F + +S+VS
Sbjct: 266 TMPATSDAVPLLGTYFNCIMFMVASSVVS 294


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 239 TKEAELDSVPIVHGGGNPILFSIVASIVS 153
           T  A  D+VP++    N I+F + +S+VS
Sbjct: 298 TMPATSDAVPLLGTYFNCIMFMVASSVVS 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,261
Number of Sequences: 2352
Number of extensions: 17155
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)