Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0012
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3442|ABC66040.1| 168|Drosophila melanogaster CG13516-P... 36 0.055
AE013599-3436|AAF46879.2| 129|Drosophila melanogaster CG13510-P... 32 0.90
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 26 2.0
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 26 2.0
AE014297-732|AAF54218.1| 318|Drosophila melanogaster CG11693-PA... 30 4.8
AE013599-3441|AAF46883.2| 144|Drosophila melanogaster CG30269-P... 30 4.8
AY070933-1|AAL48555.1| 153|Drosophila melanogaster RE03238p pro... 29 6.4
AE013599-3428|AAF46874.2| 153|Drosophila melanogaster CG30195-P... 29 6.4
AY070899-1|AAL48521.1| 584|Drosophila melanogaster RE01338p pro... 29 8.4
AE014297-3497|AAF56257.1| 584|Drosophila melanogaster CG17786-P... 29 8.4
>AE013599-3442|ABC66040.1| 168|Drosophila melanogaster CG13516-PA
protein.
Length = 168
Score = 36.3 bits (80), Expect = 0.055
Identities = 23/86 (26%), Positives = 29/86 (33%)
Frame = +1
Query: 256 PPPAGFVAPEAPPRTTVITSPQAXXXXXXXXXXXXXXXXCQTCNKTVVTRVDYVPNNRTH 435
PPP V AP TV+ + C C TR+ + N+RTH
Sbjct: 66 PPPVVVVEQPAPQPPTVVPTDTLHLGPNRSRVL------CPACGANKTTRMTHTANSRTH 119
Query: 436 XXXXXXXXXXXXXXXXFVPYCMRSLK 513
FVPYCM S +
Sbjct: 120 MVAGLLCLVGFCCCACFVPYCMNSCR 145
Score = 33.1 bits (72), Expect = 0.52
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 510 KTANHYCPQCKAFVGAFTP 566
+T NHYC +C F+GA+ P
Sbjct: 145 RTGNHYCRKCNTFLGAYNP 163
>AE013599-3436|AAF46879.2| 129|Drosophila melanogaster CG13510-PA
protein.
Length = 129
Score = 32.3 bits (70), Expect = 0.90
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 510 KTANHYCPQCKAFVGAF 560
+ ANHYCP C A++G +
Sbjct: 111 QNANHYCPNCSAYIGTY 127
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 25.8 bits (54), Expect(2) = 2.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 188 DYRHHEQSVPNPAPPP 235
D+ HH + P P PPP
Sbjct: 146 DHHHHHPAPPPPPPPP 161
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 215 PNPAPPPSYFGNNHHRLPVSLLP 283
P P PPP ++HH P + P
Sbjct: 165 PPPPPPPHSHPHSHHPHPPIVTP 187
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 25.8 bits (54), Expect(2) = 2.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 188 DYRHHEQSVPNPAPPP 235
D+ HH + P P PPP
Sbjct: 144 DHHHHHPAPPPPPPPP 159
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 215 PNPAPPPSYFGNNHHRLPVSLLP 283
P P PPP ++HH P + P
Sbjct: 163 PPPPPPPHSHPHSHHPHPPIVTP 185
>AE014297-732|AAF54218.1| 318|Drosophila melanogaster CG11693-PA
protein.
Length = 318
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 167 RRWKIKWDYRHHEQSVPNPAPPPSYFG 247
R+ K K + HH +VP P PPPS G
Sbjct: 17 RKIKRKEPHYHHHVNVPPPPPPPSPHG 43
>AE013599-3441|AAF46883.2| 144|Drosophila melanogaster CG30269-PA
protein.
Length = 144
Score = 29.9 bits (64), Expect = 4.8
Identities = 20/82 (24%), Positives = 26/82 (31%)
Frame = +1
Query: 262 PAGFVAPEAPPRTTVITSPQAXXXXXXXXXXXXXXXXCQTCNKTVVTRVDYVPNNRTHXX 441
PA P P +T T C C+ TRV + PN+RTH
Sbjct: 43 PAETTGPAPVPASTSTTQHTVVVVPGSPYGPEPMDVQCPYCHNYARTRVSFKPNSRTHLI 102
Query: 442 XXXXXXXXXXXXXXFVPYCMRS 507
+PYC+ S
Sbjct: 103 ALILCLFQLYCCVC-LPYCISS 123
>AY070933-1|AAL48555.1| 153|Drosophila melanogaster RE03238p
protein.
Length = 153
Score = 29.5 bits (63), Expect = 6.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 519 NHYCPQCKAFVGAFTP 566
NHYC C F+G F P
Sbjct: 70 NHYCSHCGCFIGRFVP 85
>AE013599-3428|AAF46874.2| 153|Drosophila melanogaster CG30195-PA
protein.
Length = 153
Score = 29.5 bits (63), Expect = 6.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 519 NHYCPQCKAFVGAFTP 566
NHYC C F+G F P
Sbjct: 70 NHYCSHCGCFIGRFVP 85
>AY070899-1|AAL48521.1| 584|Drosophila melanogaster RE01338p
protein.
Length = 584
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 191 YRHHEQSVPNPAPPPSYFGNNHHRLPVSLLP 283
YR E + P P PPP+Y +H+ P+S P
Sbjct: 8 YRAPESAAP-PPPPPNYASLRYHQHPLSHWP 37
>AE014297-3497|AAF56257.1| 584|Drosophila melanogaster CG17786-PA
protein.
Length = 584
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 191 YRHHEQSVPNPAPPPSYFGNNHHRLPVSLLP 283
YR E + P P PPP+Y +H+ P+S P
Sbjct: 8 YRAPESAAP-PPPPPNYASLRYHQHPLSHWP 37
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,427,664
Number of Sequences: 53049
Number of extensions: 767479
Number of successful extensions: 2651
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -