Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0012
         (876 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g71810.1 68414.m08299 ABC1 family protein contains Pfam domai...    29   4.1  
At3g51330.1 68416.m05619 aspartyl protease family protein contai...    28   7.1  
At5g56890.1 68418.m07099 protein kinase family protein contains ...    28   9.4  
At5g18440.1 68418.m02172 hypothetical protein                          28   9.4  
At3g12690.3 68416.m01586 protein kinase, putative similar to vir...    28   9.4  
At3g12690.2 68416.m01585 protein kinase, putative similar to vir...    28   9.4  
At3g12690.1 68416.m01584 protein kinase, putative similar to vir...    28   9.4  
At1g76930.2 68414.m08956 proline-rich extensin-like family prote...    28   9.4  
At1g76930.1 68414.m08955 proline-rich extensin-like family prote...    28   9.4  

>At1g71810.1 68414.m08299 ABC1 family protein contains Pfam domain,
           PF03109: ABC1 family
          Length = 692

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -2

Query: 563 GESTDECFTLRTVMIG--C-FNDLMQYGTKHPQQHPAKIQRAAD 441
           G+  +E   L  V +G  C FN L++YG  H   HP    R  D
Sbjct: 311 GQKLNEVNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYD 354


>At3g51330.1 68416.m05619 aspartyl protease family protein contains
           Eukaryotic and viral aspartyl proteases active site,
           PROSITE:PS00141
          Length = 529

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +1

Query: 193 PPP*TIGTESSSASFVLWQ*SPPPAGFVAPEAPPRTTVITS 315
           PPP      S SAS  L    PPPA    P+  PR +   S
Sbjct: 464 PPPPETEAPSPSASTPLPSLLPPPAAATPPQIDPRNSTRNS 504


>At5g56890.1 68418.m07099 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 1113

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +2

Query: 194 RHHEQSVPNPAPPPSYFGNNHHRLPVSLLPKHLRVLQ**HHPKHRQ 331
           RH   + P+  PPP    +N H  P S  P  L      HH  H++
Sbjct: 311 RHSHHTSPSTTPPPDSTPSNVHHHPSSPSPPPLSS----HHQHHQE 352


>At5g18440.1 68418.m02172 hypothetical protein
          Length = 451

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 200 HEQSVPNPAPPPSYFGNNHHRLPVSLLPKHLRVL 301
           H   +PN    P +F N   +LP   +P H+  L
Sbjct: 49  HNMPMPNMPIHPQFFNNMPQQLPQFAMPNHINQL 82


>At3g12690.3 68416.m01586 protein kinase, putative similar to viroid
           symptom modulation protein [Lycopersicon esculentum]
           gi|7672777|gb|AAF66637
          Length = 577

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 287 ASGATKPAGGGDYCQSTKEAEL 222
           A G TK  GGGD+C S K   L
Sbjct: 537 ARGKTKSHGGGDHCNSMKPEPL 558


>At3g12690.2 68416.m01585 protein kinase, putative similar to viroid
           symptom modulation protein [Lycopersicon esculentum]
           gi|7672777|gb|AAF66637
          Length = 577

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 287 ASGATKPAGGGDYCQSTKEAEL 222
           A G TK  GGGD+C S K   L
Sbjct: 537 ARGKTKSHGGGDHCNSMKPEPL 558


>At3g12690.1 68416.m01584 protein kinase, putative similar to viroid
           symptom modulation protein [Lycopersicon esculentum]
           gi|7672777|gb|AAF66637
          Length = 577

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 287 ASGATKPAGGGDYCQSTKEAEL 222
           A G TK  GGGD+C S K   L
Sbjct: 537 ARGKTKSHGGGDHCNSMKPEPL 558


>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 256

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 191 YRHHEQSVPNPAPPPSYFGNNHHRLPVSLLPKH 289
           Y+     V + +PPPSY   +HHR    LL  +
Sbjct: 147 YKSPPPPVKHYSPPPSYTTLHHHRFTTHLLQSY 179


>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
           contains extensin-like region, Pfam:PF04554
          Length = 293

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 191 YRHHEQSVPNPAPPPSYFGNNHHRLPVSLLPKH 289
           Y+     V + +PPPSY   +HHR    LL  +
Sbjct: 147 YKSPPPPVKHYSPPPSYTTLHHHRFTTHLLQSY 179


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,843,175
Number of Sequences: 28952
Number of extensions: 346094
Number of successful extensions: 1166
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)