Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0011
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 80 3e-15
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 3e-12
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 64 1e-10
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 57 2e-08
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 54 1e-07
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 52 6e-07
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 50 3e-06
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 46 4e-05
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 34 0.13
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 33 0.22
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 33 0.29
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 32 0.51
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 32 0.68
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 29 3.6
SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 79.8 bits (188), Expect = 3e-15
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPV 436
FFGCCGA KEN CM+I F + LLI+ E+A + GY+ ++ + ++ +I +YP
Sbjct: 422 FFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQSDLTDDIIRNIKEYP- 480
Query: 437 DKNVQKTIDIIQTDLQCCGINSPA 508
KN + ID +Q D +CCG P+
Sbjct: 481 -KNNKAAIDAMQMDFECCGAKGPS 503
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPV 436
F GCCGA KEN CM+I F FLL++ + E+ G Y +E+ + +++ +I YP
Sbjct: 69 FLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIENYP- 127
Query: 437 DKNVQKTIDIIQTDLQCCGINS 502
KN +K+I+ +QT +CCG ++
Sbjct: 128 GKN-EKSINDMQTKFKCCGADN 148
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 51 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENF 200
MAL+G + VK L+ FN +F + GLI+ VGI A Y+ N+
Sbjct: 1 MALQGSSNIVKILVIIFNFIFFLFGLILFGVGIWASTKLGAYVEIASVNY 50
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-- 430
FFGCCGA+KE+ C++ TF L II E+ GY+ +E+ + +++N +I Y
Sbjct: 341 FFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGE 400
Query: 431 PVDKNVQKTIDIIQTDLQCCGIN 499
+ + D IQ +CCGIN
Sbjct: 401 KGKEGITDAYDAIQKKEKCCGIN 423
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 532 IPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLVVHMKDIGMVLAGVGVG 687
+P +CC ++ G EN + ++KGC + +KD +++ G+G+G
Sbjct: 441 VPDSCCKT--VSKGCGINFKEN--DIYTKGCFDTVKTLLKDNLIIIGGIGIG 488
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPV 436
F GC GA++EN C++ FSV L IIF +LA+G+ ++ +E ++ L ++T+Y
Sbjct: 62 FSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQTAVTKYRD 121
Query: 437 DKNVQKTIDIIQTDLQCCG 493
+ ++Q ID +Q + +CCG
Sbjct: 122 NADLQNLIDGVQQEFKCCG 140
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPV 436
FFGC GA+KEN + ++ +F+ + +A G+ +++ L D R L + Y
Sbjct: 88 FFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKAR-LEDGLKSYQQ 146
Query: 437 DKNVQKTIDIIQTDLQCCGINS 502
D + Q+ ID IQT +CCGI S
Sbjct: 147 DSSKQEFIDFIQTRFKCCGIES 168
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 245 FHCPFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 424
F FGC GA++EN C++ + II + G G+ LE V L +I
Sbjct: 115 FVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQLKDAIV 174
Query: 425 QY--PVDKNVQKTIDIIQTDLQCCGI 496
Y P ++ ID +QT+LQCCG+
Sbjct: 175 LYRDPTKGDLHLIIDTVQTELQCCGV 200
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 75 CVKYLMFCFNLLFAITGLIILIVGI 149
CVKY +F N++F + G +IL VGI
Sbjct: 59 CVKYSLFTINVIFWLAGAVILAVGI 83
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 245 FHCPFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 424
F FFGC GA++EN C + + + + + +A G Y + D ++ L +
Sbjct: 89 FFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQ-KDKVQALKERLKQDLK 147
Query: 425 QYPVDKNVQKTIDIIQTDLQCCGINS 502
+Y D Q ID +QT L+CCG+ S
Sbjct: 148 KYLDDPLNQDLIDFMQTLLKCCGVES 173
Score = 32.7 bits (71), Expect = 0.39
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 75 CVKYLMFCFNLLFAITGLIILIVGI 149
C KY +F N++F I GL+++ VG+
Sbjct: 27 CTKYTLFFINVIFFILGLLVMTVGV 51
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPV 436
F CCGA+KE+ CM+ T+ + IF E+ + Y+ +E ++ ++ +++ +Y +
Sbjct: 74 FLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRSTMNEYHL 133
Query: 437 DKN--VQKTIDIIQTDLQCCG 493
+ V + ID I D +CCG
Sbjct: 134 SGHDAVTRAIDEIHRDFKCCG 154
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 51 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGI 149
M+ + G C+K+++F FNLLF + G I +G+
Sbjct: 1 MSTDWGFKCIKFMVFFFNLLFLLAGCAIFAIGV 33
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +2
Query: 263 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PV 436
GC GA++EN ++ + + + + ++ GIA YM +D V+ L + Y P
Sbjct: 99 GCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMH----QDKVVEKLKDDLKHYRDPD 154
Query: 437 DKNVQKTIDIIQTDLQCCGINS 502
+N Q ID +QT+L+CCG+NS
Sbjct: 155 KENFQFLIDRLQTNLKCCGVNS 176
Score = 33.5 bits (73), Expect = 0.22
Identities = 10/25 (40%), Positives = 21/25 (84%)
Frame = +3
Query: 72 SCVKYLMFCFNLLFAITGLIILIVG 146
+C+KY++F N++F + G++IL++G
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIG 61
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 52.0 bits (119), Expect = 6e-07
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYM---KHTDLEDS--VMRNLNASI 421
FFGC GA KEN CM+ TF V LLI+ E+A + Y K++ DS V + + +
Sbjct: 71 FFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKNSLNSDSVKVKDEIESDL 130
Query: 422 TQ-------YPVDKNVQKTIDIIQTDLQCCGIN 499
T+ V K D +Q +CCG+N
Sbjct: 131 TKALKGDYGSSGQDGVTKAFDALQEKQKCCGVN 163
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 263 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PV 436
GC GA++EN ++ + + + + ++ G A Y+ D V+ L + Y P
Sbjct: 99 GCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHR----DKVVAKLKDDLQHYRDPD 154
Query: 437 DKNVQKTIDIIQTDLQCCGINS 502
+N Q ID +QT+L+CCGINS
Sbjct: 155 KENFQFLIDRLQTNLKCCGINS 176
Score = 33.5 bits (73), Expect = 0.22
Identities = 10/25 (40%), Positives = 21/25 (84%)
Frame = +3
Query: 72 SCVKYLMFCFNLLFAITGLIILIVG 146
+C+KY++F N++F + G++IL++G
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIG 61
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 46.0 bits (104), Expect = 4e-05
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = +2
Query: 263 GCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDK 442
GC +KEN +++++ + L++IF+ E+A G+ + +++ + + + +Y
Sbjct: 77 GCVAVIKENRFILVSYLIMLVLIFILEIATGVVAVIYRSEISYELEVGIRGKMNRYGFTD 136
Query: 443 NVQKTIDIIQTD 478
V K ID +Q +
Sbjct: 137 AVTKAIDDLQKE 148
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 36.7 bits (81), Expect = 0.024
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIIT 307
FFGCCGAVKE+ CM+ T
Sbjct: 329 FFGCCGAVKESRCMLAT 345
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 25/84 (29%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIIT-------------------------FSVFLLIIFVAELAVGIA 361
F GCCGA+KE+ C++ T F V L ++F+ EL I
Sbjct: 90 FIGCCGALKEHTCLLKTVSIKSILYGYMYAKKISLTIRIYLQFGVILGLLFLVELGTAIT 149
Query: 362 GYMKHTDLEDSVMRNLNASITQYP 433
GY+ ++++ + L+ ++ YP
Sbjct: 150 GYIFRSEIKTGLSDGLDTALKDYP 173
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFS 313
F GCCGAVKEN C ++ S
Sbjct: 214 FVGCCGAVKENKCFLLLVS 232
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 66 GMSCVKYLMFCFNLLFAITGLI 131
GM C+KYL+F FN +F + +I
Sbjct: 76 GMQCMKYLLFAFNFVFWCSKII 97
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 33.5 bits (73), Expect = 0.22
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 257 FFGCCGAVKENHCMI 301
FFGCCGA+KE+ C++
Sbjct: 41 FFGCCGAIKESRCLL 55
>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
Length = 691
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +1
Query: 544 CCSAQEINDG------VVAACTENSTNFHSKGCLTKLVVHMKDIGMVLAGVGVGYRF 696
CC ++ ND V +C + + SK C+ L +KD +V+ GVG+G F
Sbjct: 464 CCGYEDSNDHGYKNSTVPKSCKDTNGTVFSKNCVKGLEKFLKDHLIVVGGVGIGIAF 520
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 272 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVDKN 445
GA K+N+ ++ +V +IFV E+++G + + S + ++ Y
Sbjct: 82 GAFKQNNRVLTILAVLFFVIFVTEISLGANSLTLRNEGISKSSTSASGLQLLSIYGEHPG 141
Query: 446 VQKTIDIIQTDLQCCGI 496
V + ID Q CCG+
Sbjct: 142 VTEMIDNTQMGSMCCGV 158
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +1
Query: 532 IPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLVVHMKDIGMVLAGVGVGYRFWFSSS 711
+P +CC ++ + + T +GC V + +D +++ GV +G +
Sbjct: 306 VPESCCKDTKVKSCNLEVLSHPETINSEQGCYGAAVKYFEDKLVIIGGVALGLAVFQLIG 365
Query: 712 VWIFACCL 735
+ F+CCL
Sbjct: 366 I-AFSCCL 372
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 257 FFGCCGAVKENHCMIITFSVFL 322
F GCCGA+KE+ C++ T L
Sbjct: 232 FIGCCGALKEHTCLLKTIKTGL 253
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 263 GCCGAVKENHCMIITFSVFLLIIFVAELAVGI 358
G C + N C++ T+ F+LI+ VAE+ + +
Sbjct: 36 GVCALLYMNPCLLKTYFSFMLILVVAEVTIAV 67
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 287 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDI 466
N ++ T V LI +A I + + S++ +L I +P + +D
Sbjct: 32 NRVLMFTGCVLALISLAGIVAAIINSKVFLIIINRSILADLKNRIKNFPGPGT--RVVDS 89
Query: 467 IQTDLQCCGINS 502
IQ LQCCG +S
Sbjct: 90 IQERLQCCGADS 101
>SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 113 CHYGIDHPDSWHQG*NKLVSLHELHR*ELLQVRSDRSHH 229
C+Y + PD+W + + SL R E++ R S+H
Sbjct: 120 CYYSLQPPDNWDKKKTSIQSLCSRERKEVITSRYQTSNH 158
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 163 FISALMPTIRMINPVMANRRLKQNMRYF 80
FI+ALM I +I +M + L++ M YF
Sbjct: 39 FITALMGNIILITVIMKTKSLRRTMNYF 66
>SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 839
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 155 SPDANYQDDQSRNGKQKIEAKHEVLYTG---HSTFESHC 48
SP ++ RNG+ K+E+ YTG H+ +SHC
Sbjct: 22 SPLHAHKQSHCRNGEPKVESNKVQYYTGSPLHAHKQSHC 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,527,590
Number of Sequences: 59808
Number of extensions: 538738
Number of successful extensions: 1616
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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