Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0010
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33610| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_51911| Best HMM Match : NTP_transferase (HMM E-Value=1.4e-11) 39 0.004
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 31 0.77
SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07) 31 1.3
SB_56852| Best HMM Match : CemA (HMM E-Value=1.5) 29 3.1
SB_12913| Best HMM Match : Hormone_2 (HMM E-Value=3.1) 29 5.4
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 28 7.2
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 28 7.2
SB_23186| Best HMM Match : Cornifin (HMM E-Value=1.3) 28 9.5
SB_31528| Best HMM Match : DDHD (HMM E-Value=2e-29) 28 9.5
>SB_33610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 72.1 bits (169), Expect = 4e-13
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 288 EHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDGRLNPSITIL 458
+H I+YS++G +VG+W+R+EG DP+PN FA+ D LF T+G+L PSITIL
Sbjct: 106 DHCCILYSIIGWNCTVGQWARIEGHRCDPNPNDQFARPDGESLFGTNGKLTPSITIL 162
>SB_51911| Best HMM Match : NTP_transferase (HMM E-Value=1.4e-11)
Length = 280
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +3
Query: 261 IILENATVNEHSLIMYSVVGREASVGEWSRVEG 359
++L++AT+ HS I S++G ++ VG+W R+EG
Sbjct: 210 VVLKDATIRSHSWIQSSIIGWKSVVGQWVRMEG 242
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 SIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPS-DPDPNKPFAKMDNRPLFNTDGR 434
S + E TVN S I S G +SV E V TPS P PN + + N+
Sbjct: 372 SSVYETITVNSTSSISPSPNGTTSSVYETIAVNSTPSISPSPNGTTSSVYETIAVNSTSS 431
Query: 435 LNPS 446
++PS
Sbjct: 432 ISPS 435
>SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07)
Length = 2008
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 22 NKLYSMQVSSWWSQVKXAGSAIYANRHCLT---LHCTRDDVCQIIPDVYIHPXASVDSTA 192
N + + + SWW + A +Y +CL LHC ++ C+II +V + +
Sbjct: 1876 NSSFGIFILSWWYLIS-AALTVYNLVNCLQKSELHCDKETNCEIIHEVDSEADKKMQNNE 1934
Query: 193 VIGPN 207
V N
Sbjct: 1935 VASQN 1939
>SB_56852| Best HMM Match : CemA (HMM E-Value=1.5)
Length = 545
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -3
Query: 666 HFTSFFKKSPQI-PKSMRTECITYSPVLSFSKNKIKXYNMISCLKLLAKC 520
HF +FF+K P + P+++ + +S V++FS NK +++ L L +KC
Sbjct: 373 HFENFFRKLPSVLPENVLLQ--PFSVVVTFSINK-GSFHLQDLLDLCSKC 419
>SB_12913| Best HMM Match : Hormone_2 (HMM E-Value=3.1)
Length = 131
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 213 HRYGRYNKSWRQNKESIILENATVNEHSLIMYSVVGREASVG 338
H G YN + +++ L NATV EHS +Y+ +E S G
Sbjct: 41 HLRGLYNTTVKEHSRG--LYNATVKEHSSGLYNTTVKEHSRG 80
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -3
Query: 663 FTSFFKKSPQIPKSMRTECITYSPVLSFSKNKIKXYNMISCLK 535
F +FF+KS +PKS T+ S LS S I+ + M+ C++
Sbjct: 870 FYTFFRKSNLVPKS--TKSYDPSSNLSRSDISIRAWGMVICVR 910
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 126 RRRLSDHTRRLHT-PXRQCRLNGCHRA*RLHRYGRYNKSWRQNKESIILENATVNE 290
RR L RR HT R+ LNG + + + + W +NKE+ L + VNE
Sbjct: 291 RRPLDIAVRRNHTVAARKLILNGAEVKVEIEDWVKRCECWTENKEAEQLVHRNVNE 346
>SB_23186| Best HMM Match : Cornifin (HMM E-Value=1.3)
Length = 342
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 427 SVLNSGRLSILAKGLFGSGSEGVPST 350
S L G LSIL KG + +EG PST
Sbjct: 10 STLTEGGLSILTKGRLSTLTEGGPST 35
>SB_31528| Best HMM Match : DDHD (HMM E-Value=2e-29)
Length = 1123
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 352 TRDHSPTEASRPTTEYMIRECSFTV 278
TR HSP + + PTT R SF+V
Sbjct: 702 TRRHSPNDLTYPTTSLTTRPSSFSV 726
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,399,156
Number of Sequences: 59808
Number of extensions: 444615
Number of successful extensions: 1160
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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