Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0010
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007456-1|AAH07456.1| 420|Homo sapiens GDP-mannose pyrophospho... 105 2e-22
AK222951-1|BAD96671.1| 420|Homo sapiens GDP-mannose pyrophospho... 105 2e-22
AK000999-1|BAA91460.1| 420|Homo sapiens protein ( Homo sapiens ... 105 2e-22
AC053503-4|AAY15053.1| 420|Homo sapiens unknown protein. 105 2e-22
AF135422-1|AAD38517.1| 399|Homo sapiens GDP-mannose pyrophospho... 74 5e-13
BC008033-1|AAH08033.1| 360|Homo sapiens GDP-mannose pyrophospho... 43 0.001
BC001141-1|AAH01141.1| 360|Homo sapiens GDP-mannose pyrophospho... 43 0.001
AK024319-1|BAB14882.1| 387|Homo sapiens protein ( Homo sapiens ... 43 0.001
AF135421-1|AAD38516.1| 360|Homo sapiens GDP-mannose pyrophospho... 43 0.001
AY450393-1|AAR21086.1| 144|Homo sapiens DNA polymerase-transact... 31 4.5
AY450389-1|AAR21082.1| 144|Homo sapiens DNA polymerase-transact... 31 4.5
AK091785-1|BAC03748.1| 144|Homo sapiens protein ( Homo sapiens ... 31 4.5
>BC007456-1|AAH07456.1| 420|Homo sapiens GDP-mannose
pyrophosphorylase A protein.
Length = 420
Score = 105 bits (252), Expect = 2e-22
Identities = 48/86 (55%), Positives = 67/86 (77%)
Frame = +3
Query: 252 KESIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDG 431
+ESI+L AT+ EH+ +++S+VG ++VG W+RVEGTPSDP+PN P A+MD+ LF DG
Sbjct: 320 RESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFK-DG 378
Query: 432 RLNPSITILGAGVVVXAETILLNSIV 509
+L P+ITILG V + AE ++LNSIV
Sbjct: 379 KLLPAITILGCRVRIPAEVLILNSIV 404
Score = 67.7 bits (158), Expect = 4e-11
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR--DDVCQIIP-------DVYI 162
LAG ++Y WSQ+K AGSA+YA+R L+ + + + + P +VYI
Sbjct: 230 LAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYI 289
Query: 163 HPXASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
HP A V +AV+GPNVSIG GVT+ GVR++
Sbjct: 290 HPTAKVAPSAVLGPNVSIGKGVTVGEGVRLR 320
>AK222951-1|BAD96671.1| 420|Homo sapiens GDP-mannose
pyrophosphorylase A variant protein.
Length = 420
Score = 105 bits (252), Expect = 2e-22
Identities = 48/86 (55%), Positives = 67/86 (77%)
Frame = +3
Query: 252 KESIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDG 431
+ESI+L AT+ EH+ +++S+VG ++VG W+RVEGTPSDP+PN P A+MD+ LF DG
Sbjct: 320 RESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFK-DG 378
Query: 432 RLNPSITILGAGVVVXAETILLNSIV 509
+L P+ITILG V + AE ++LNSIV
Sbjct: 379 KLLPAITILGCRVRIPAEVLILNSIV 404
Score = 67.7 bits (158), Expect = 4e-11
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR--DDVCQIIP-------DVYI 162
LAG ++Y WSQ+K AGSA+YA+R L+ + + + + P +VYI
Sbjct: 230 LAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYI 289
Query: 163 HPXASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
HP A V +AV+GPNVSIG GVT+ GVR++
Sbjct: 290 HPTAKVAPSAVLGPNVSIGKGVTVGEGVRLR 320
>AK000999-1|BAA91460.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10137 fis, clone HEMBA1003136, weakly similar to
MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE (EC 2.7.7.13). ).
Length = 420
Score = 105 bits (252), Expect = 2e-22
Identities = 48/86 (55%), Positives = 67/86 (77%)
Frame = +3
Query: 252 KESIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDG 431
+ESI+L AT+ EH+ +++S+VG ++VG W+RVEGTPSDP+PN P A+MD+ LF DG
Sbjct: 320 RESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFK-DG 378
Query: 432 RLNPSITILGAGVVVXAETILLNSIV 509
+L P+ITILG V + AE ++LNSIV
Sbjct: 379 KLLPAITILGCRVRIPAEVLILNSIV 404
Score = 67.7 bits (158), Expect = 4e-11
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR--DDVCQIIP-------DVYI 162
LAG ++Y WSQ+K AGSA+YA+R L+ + + + + P +VYI
Sbjct: 230 LAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYI 289
Query: 163 HPXASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
HP A V +AV+GPNVSIG GVT+ GVR++
Sbjct: 290 HPTAKVAPSAVLGPNVSIGKGVTVGEGVRLR 320
>AC053503-4|AAY15053.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 105 bits (252), Expect = 2e-22
Identities = 48/86 (55%), Positives = 67/86 (77%)
Frame = +3
Query: 252 KESIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDG 431
+ESI+L AT+ EH+ +++S+VG ++VG W+RVEGTPSDP+PN P A+MD+ LF DG
Sbjct: 320 RESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFK-DG 378
Query: 432 RLNPSITILGAGVVVXAETILLNSIV 509
+L P+ITILG V + AE ++LNSIV
Sbjct: 379 KLLPAITILGCRVRIPAEVLILNSIV 404
Score = 67.7 bits (158), Expect = 4e-11
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR--DDVCQIIP-------DVYI 162
LAG ++Y WSQ+K AGSA+YA+R L+ + + + + P +VYI
Sbjct: 230 LAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYI 289
Query: 163 HPXASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
HP A V +AV+GPNVSIG GVT+ GVR++
Sbjct: 290 HPTAKVAPSAVLGPNVSIGKGVTVGEGVRLR 320
>AF135422-1|AAD38517.1| 399|Homo sapiens GDP-mannose
pyrophosphorylase A protein.
Length = 399
Score = 74.1 bits (174), Expect = 5e-13
Identities = 62/168 (36%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR--DDVCQIIP-------DVYI 162
LAG ++Y WSQ+K AGSA+YA+R L+ + + + + P +VYI
Sbjct: 230 LAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYI 289
Query: 163 HPXASVDSTAVIGPNVSIGTGVTIKAGVRIKNQ--*YSKTRP*MSTP*SCIL---LSVGK 327
HP A V +AV+GPNVSIG GVT+ GVR++ + T + CI+ +VG+
Sbjct: 290 HPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHCIVGWGSTVGR 349
Query: 328 LQWANGRV*KELLQILIRTNPSPRWTTDRYSIRTDDSTRLSLYWVQES 471
WA V L T P P WT R S RT LS W ES
Sbjct: 350 --WARVEVPP---VTLTPTIPEPAWTV-RASSRTGSCCLLSPSWAAES 391
>BC008033-1|AAH08033.1| 360|Homo sapiens GDP-mannose
pyrophosphorylase B protein.
Length = 360
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR----DDVCQ---IIPDVYIHP 168
+A +LY+M++ +W + + CL L R + +C I+ +V + P
Sbjct: 201 MAKEGQLYAMELQGFWMDIGQPKD--FLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDP 258
Query: 169 XASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
A + IGPNVS+G GV ++ GV I+
Sbjct: 259 SARIGQNCSIGPNVSLGPGVVVEDGVCIR 287
>BC001141-1|AAH01141.1| 360|Homo sapiens GDP-mannose
pyrophosphorylase B protein.
Length = 360
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR----DDVCQ---IIPDVYIHP 168
+A +LY+M++ +W + + CL L R + +C I+ +V + P
Sbjct: 201 MAKEGQLYAMELQGFWMDIGQPKD--FLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDP 258
Query: 169 XASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
A + IGPNVS+G GV ++ GV I+
Sbjct: 259 SARIGQNCSIGPNVSLGPGVVVEDGVCIR 287
>AK024319-1|BAB14882.1| 387|Homo sapiens protein ( Homo sapiens
cDNA FLJ14257 fis, clone PLACE1000547, highly similar to
Homo sapiens GDP-mannose pyrophosphorylase B (GMPPB)
mRNA. ).
Length = 387
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR----DDVCQ---IIPDVYIHP 168
+A +LY+M++ +W + + CL L R + +C I+ +V + P
Sbjct: 201 MAKEGQLYAMELQGFWMDIGQPKD--FLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDP 258
Query: 169 XASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
A + IGPNVS+G GV ++ GV I+
Sbjct: 259 SARIGQNCSIGPNVSLGPGVVVEDGVCIR 287
>AF135421-1|AAD38516.1| 360|Homo sapiens GDP-mannose
pyrophosphorylase B protein.
Length = 360
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR----DDVCQ---IIPDVYIHP 168
+A +LY+M++ +W + + CL L R + +C I+ +V + P
Sbjct: 201 MAKEGQLYAMELQGFWMDIGQPKD--FLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDP 258
Query: 169 XASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
A + IGPNVS+G GV ++ GV I+
Sbjct: 259 SARIGQNCSIGPNVSLGPGVVVEDGVCIR 287
>AY450393-1|AAR21086.1| 144|Homo sapiens DNA
polymerase-transactivated protein 5 protein.
Length = 144
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 386 TLRQDGQPTAIQYGRTTQPVYHYIGCRSRGTR*DDFVKLHSLPHKHXARSFK 541
TLR GQP +G T+P YH + RS G L SLP + A SF+
Sbjct: 8 TLRCVGQP---HHGEWTEPAYHMLRLRSPGLMIGAIQDLSSLPSQR-AMSFR 55
>AY450389-1|AAR21082.1| 144|Homo sapiens DNA
polymerase-transactivated protein 1 protein.
Length = 144
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 386 TLRQDGQPTAIQYGRTTQPVYHYIGCRSRGTR*DDFVKLHSLPHKHXARSFK 541
TLR GQP +G T+P YH + RS G L SLP + A SF+
Sbjct: 8 TLRCVGQP---HHGEWTEPAYHMLRLRSPGLMIGAIQDLSSLPSQR-AMSFR 55
>AK091785-1|BAC03748.1| 144|Homo sapiens protein ( Homo sapiens
cDNA FLJ34466 fis, clone HLUNG2003162. ).
Length = 144
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 386 TLRQDGQPTAIQYGRTTQPVYHYIGCRSRGTR*DDFVKLHSLPHKHXARSFK 541
TLR GQP +G T+P YH + RS G L SLP + A SF+
Sbjct: 8 TLRCVGQP---HHGEWTEPAYHMLRLRSPGLMIGAIQDLSSLPSQR-AMSFR 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,915,459
Number of Sequences: 237096
Number of extensions: 2099420
Number of successful extensions: 4642
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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