Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0010
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006780-7|AAF60648.1|  394|Caenorhabditis elegans Hypothetical ...   109   2e-24
AC006780-6|AAF60647.1|  401|Caenorhabditis elegans Hypothetical ...   109   2e-24
CU457741-18|CAM36360.1|  365|Caenorhabditis elegans Hypothetical...    36   0.024
Z81470-3|CAB03880.1|  401|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm rece...    28   8.3  

>AC006780-7|AAF60648.1|  394|Caenorhabditis elegans Hypothetical
           protein Y47D9A.1b protein.
          Length = 394

 Score =  109 bits (262), Expect = 2e-24
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = +3

Query: 252 KESIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDG 431
           KESIIL  A + E++ ++ SV+G  + VG W+R+EG P +P+PN PFAKMDN+PLF  DG
Sbjct: 293 KESIILPEAVIEENACVLQSVIGWRSVVGMWARIEGIPLEPNPNLPFAKMDNKPLFLPDG 352

Query: 432 RLNPSITILGAGVVVXAETILLNSIV 509
           RL PS+TILG+ V V  ETI+LN +V
Sbjct: 353 RLTPSLTILGSDVSVAPETIILNCVV 378



 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
 Frame = +1

Query: 10  LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR------DDVCQIIPDVYIHPX 171
           LA +  LY++  + WWSQ K A + +YANRH L L+  R       +  QII DV+I P 
Sbjct: 206 LASSGNLYALHTTRWWSQTKTAAAVLYANRHYLRLYKRRYAARLCKNGAQIIGDVFIDPS 265

Query: 172 ASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
           A V  TA IGPNVSIG    I  GVRIK
Sbjct: 266 AKVHPTAKIGPNVSIGPKSVIGKGVRIK 293


>AC006780-6|AAF60647.1|  401|Caenorhabditis elegans Hypothetical
           protein Y47D9A.1a protein.
          Length = 401

 Score =  109 bits (262), Expect = 2e-24
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = +3

Query: 252 KESIILENATVNEHSLIMYSVVGREASVGEWSRVEGTPSDPDPNKPFAKMDNRPLFNTDG 431
           KESIIL  A + E++ ++ SV+G  + VG W+R+EG P +P+PN PFAKMDN+PLF  DG
Sbjct: 300 KESIILPEAVIEENACVLQSVIGWRSVVGMWARIEGIPLEPNPNLPFAKMDNKPLFLPDG 359

Query: 432 RLNPSITILGAGVVVXAETILLNSIV 509
           RL PS+TILG+ V V  ETI+LN +V
Sbjct: 360 RLTPSLTILGSDVSVAPETIILNCVV 385



 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
 Frame = +1

Query: 10  LAGTNKLYSMQVSSWWSQVKXAGSAIYANRHCLTLHCTR------DDVCQIIPDVYIHPX 171
           LA +  LY++  + WWSQ K A + +YANRH L L+  R       +  QII DV+I P 
Sbjct: 213 LASSGNLYALHTTRWWSQTKTAAAVLYANRHYLRLYKRRYAARLCKNGAQIIGDVFIDPS 272

Query: 172 ASVDSTAVIGPNVSIGTGVTIKAGVRIK 255
           A V  TA IGPNVSIG    I  GVRIK
Sbjct: 273 AKVHPTAKIGPNVSIGPKSVIGKGVRIK 300


>CU457741-18|CAM36360.1|  365|Caenorhabditis elegans Hypothetical
           protein C42C1.5 protein.
          Length = 365

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
 Frame = +1

Query: 10  LAGTNKLYSMQVSSWWSQVKXA-----GSAIYANRHCLTLHCTRDDVCQ----------I 144
           +A +  LY+  +  +W  V        G +++ N HC   H T+ D  +          I
Sbjct: 200 MAFSGNLYAFVLPGFWMDVGQPKDFLKGMSLFLN-HC---HTTKSDKLETGSNIHPTATI 255

Query: 145 IPDVYIHPXASVDSTAVIGPNVSIGTGVTIKAGVRI 252
             +V + P A+V    VIGP+V IG  V I+ GVRI
Sbjct: 256 RGNVMVDPSATVGENCVIGPDVVIGPRVKIEGGVRI 291



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 258 SIILENATVNEHSLIMYSVVGREASVGEWSRVE 356
           S IL ++++  +S +  S+VGR+  +G W R+E
Sbjct: 294 STILSDSSIGNYSWVSGSIVGRKCHIGSWVRIE 326


>Z81470-3|CAB03880.1|  401|Caenorhabditis elegans Hypothetical
           protein C14A6.3 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 264 ILENATVNEHSLIMYSVVGREASVGEWS 347
           ILE + VN HS+ +YS V R+A   +W+
Sbjct: 37  ILEKS-VNSHSIQLYSRVSRDAKSDKWA 63


>AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm
           receptor protein 253 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 687 HVPAXETHFTSFFKKSPQIPKSMRTECITYSPVLS 583
           H+PA  T+ TSFF  S +I   +    I   PVL+
Sbjct: 274 HIPATVTYITSFFNVSSEIFGEILDLSIALYPVLN 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,289,488
Number of Sequences: 27780
Number of extensions: 321942
Number of successful extensions: 860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)