Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0004
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1416 - 26915306-26915459,26915553-26915668,26915798-269159...    31   1.1  
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775...    29   4.6  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    29   6.1  
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565...    29   6.1  

>08_02_1416 -
           26915306-26915459,26915553-26915668,26915798-26915910,
           26915995-26916130,26916219-26916338,26916472-26916648,
           26916790-26916862,26916948-26917083,26917179-26918055,
           26918138-26918331,26918438-26918620,26918730-26918796,
           26918900-26919092,26919317-26919363,26919478-26919574,
           26919663-26919790,26919905-26920009,26920763-26920879
          Length = 1010

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 145 PLPDKDAIXAEKEKNKFLNGIENFDPTKLKHTETCEKTRSPQRTSLSKRNQL 300
           P+P  DAI A    N  L G+      K +H+   ++ RSP+R    +RN L
Sbjct: 639 PMPSLDAIAAHH--NISLEGLPPLPFQKQEHSPDKDEVRSPKRACTERRNVL 688


>07_03_0735 +
           21075033-21075846,21077065-21077199,21077384-21077517,
           21077604-21077814,21078033-21078270,21078346-21078496,
           21078593-21078931
          Length = 673

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 25  KIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 144
           K VLPS E++A ++   S   GIE+  +  +   + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 103 DSSQLKHTETQEKNPLPDKDAIXAEKEKNKFLNGIENFDPTKLKHTETCEKTRSPQRTSL 282
           DS QLK +  ++K+P    +    +K  + F NGI+    +K K     +   S   T  
Sbjct: 419 DSHQLKDSVVEDKDPRHLTEGSLPDKAASNFKNGIKPSASSKQKQQNDSQSEISDHTTGA 478

Query: 283 S 285
           S
Sbjct: 479 S 479


>03_05_0754 +
           27452203-27452242,27452360-27455611,27456480-27456533,
           27456774-27456872,27456948-27457012,27457476-27457575,
           27458326-27458408,27458494-27458569,27458920-27459698
          Length = 1515

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +3

Query: 114 AEAHRDSGEEPASGQRRYXSGEGKEQ----IPERHRELRSH*AEAHGDVRKNPLPTKDVI 281
           AEA R + E  A  +    SGE + +    + E+ + LR H   AH  +R +     D +
Sbjct: 63  AEAERQAREVAARDEEISSSGEARRELEARLAEKEQALR-HLCAAHEGLRSSARERSDAL 121

Query: 282 EQEK 293
           E EK
Sbjct: 122 EAEK 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,136,259
Number of Sequences: 37544
Number of extensions: 328098
Number of successful extensions: 844
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)