Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0003
(854 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 24 1.3
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 24 1.3
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 24 1.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 3.1
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 21 9.4
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 21 9.4
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 NIAHXALFLQDNLVKSDYGLSK-ENFNYFLNALKNDLDTLA 141
++AH A L + D L ENFN F+ ALK+++ A
Sbjct: 255 SVAHTAGELLGAVYSLDLELKHIENFNDFVTALKDNVPVFA 295
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 NIAHXALFLQDNLVKSDYGLSK-ENFNYFLNALKNDLDTLA 141
++AH A L + D L ENFN F+ ALK+++ A
Sbjct: 255 SVAHTAGELLGAVYSLDLELKHIENFNDFVTALKDNVPVFA 295
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 NIAHXALFLQDNLVKSDYGLSK-ENFNYFLNALKNDLDTLA 141
++AH A L + D L ENFN F+ ALK+++ A
Sbjct: 575 SVAHTAGELLGAVYSLDLELKHIENFNDFVTALKDNVPVFA 615
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 574 CSSGLCFSKKSVIRAAKCAHEVIKPSKYSLSKAAKVS 464
C+ G K + K HE KP + LS A S
Sbjct: 1954 CNKGPASDKSAFADFVKELHEAFKPKGWLLSAAVSPS 1990
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 50 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 126 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 202 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 240
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 278 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 316
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 354 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 392
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 430 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 468
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 506 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 544
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 582 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 620
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
L+D SDY + KE+ + + L+ + + + K+
Sbjct: 22 LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,571
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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