Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0003
(854 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.64
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.64
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.64
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.64
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.64
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.64
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.64
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.64
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.64
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.64
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.64
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 29 0.84
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 1.5
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.5
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces... 28 1.5
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 28 1.9
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 3.4
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 27 3.4
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 3.4
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 4.5
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 26 5.9
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 26 5.9
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 489 EYLDGLMTSWAHFAALITDFFEKHKPELQEF 581
E LDG+ TS H L KH PE+ +F
Sbjct: 19 ENLDGIQTSDEHLINLFAKILSKHVPEIGKF 49
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 29.1 bits (62), Expect = 0.84
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 446 GFELXXIXFRNLFHCLDVRVNXX-LHNRLSTFVDGIEYLSEELDYXVES 303
GF + ++N+F ++V+ N + TF I+Y+ E D+ VES
Sbjct: 337 GFHICRWGYKNVFDLVEVKENFKNFEIPVDTFWSDIDYMYEYRDFTVES 385
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 NALKNDLDTLAERIKEKSEKAGQEI-STISQKTAPYFKKIDEDFRREWSNFTRKSLMIRL 285
+++K+DL + +R+KE+ E E+ S I+ +T F+ + + + N + R+
Sbjct: 519 SSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARM 578
>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 563
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -1
Query: 365 LSTFVDGIEY-LSEELDYXVESMR*FLQSLIISDFLVKLLHSLRKSSSIFLK 213
LSTF G+EY +S L + ++ F I++ VK ++ LRK+ SIF K
Sbjct: 91 LSTFDPGVEYRVSIGLMLLLSALIGFCSESIVTS--VKSVYKLRKAHSIFSK 140
>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 73 YGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
YG+S N F + L+N + L+ +K++ + E S ++ + KK +E F
Sbjct: 214 YGISLPNLGIFTHILRNSRNDLSNYLKKRPYREVIESSLYNRNVSVACKKKNEAF 268
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 76 GLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDED 234
G S+E+ + F+ L+ +LD + K KS + + I ++T +++D D
Sbjct: 37 GWSEEDESDFVELLEKELDKVYSFQKNKSAEVMERIRFCEEQTDEVVRRLDSD 89
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 231 RLPQRMEQFYQEVTDDKTLKELSHAFNXIVQFFAKIFDTIYKGTEPIVEXXINTYVETVK 410
+L E ++ + +K + N I++ F ++D I P V ++ YVET+
Sbjct: 424 KLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDIIKAKLPPNVAEKVDYYVETII 483
Query: 411 KIAE 422
+ E
Sbjct: 484 ETPE 487
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 148 IKEKSEKAGQEISTISQKTAPYFKKIDEDFR 240
+KEK ++ + + + +KT P KK +ED +
Sbjct: 152 MKEKDNESDKTMKDVEEKTEPSLKKEEEDIQ 182
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 720 FEREVERFWVVSREVPDVDPVLVPAI 797
FE + E FW+V + PVL+ I
Sbjct: 1511 FENDTEEFWMVPARFGKISPVLIEQI 1536
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +1
Query: 70 DYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREW 249
D L N L + L E ++E TIS+K P+ K+I ++ EW
Sbjct: 254 DRSLPALNIQRSLMDILTKLPIQTEHLRESKIGRIVLFYTISKKPEPFIKRIADNLVSEW 313
Query: 250 S 252
S
Sbjct: 314 S 314
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 510 TSWAHFAALITDFFEKHKPELQEFTNVIHRYIQRSNP 620
T +HF L+ + EK+ L+EFT+ + Y Q P
Sbjct: 404 TEASHFEHLLRPYMEKYHMTLEEFTHA-YNYQQIHEP 439
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 115 LKNDLDTLAERIKEKSEKAGQEISTISQKTAPYF---KKIDEDFRREWSN 255
LKND + E+ KS G ++ + P F ++IDE + W++
Sbjct: 574 LKNDTTEIKEKKNSKSRVVGNTENSKDEFNNPLFETEEQIDESWMENWND 623
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,143,842
Number of Sequences: 5004
Number of extensions: 59645
Number of successful extensions: 205
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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