Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0003
         (854 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027300-1|BAB55025.1|  212|Homo sapiens protein ( Homo sapiens ...    31   4.0  
BC060803-1|AAH60803.1|  715|Homo sapiens chromosome 6 open readi...    31   5.3  
AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open readi...    31   5.3  
AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open readi...    31   5.3  
AK026958-1|BAB15602.1|  715|Homo sapiens protein ( Homo sapiens ...    31   5.3  

>AK027300-1|BAB55025.1|  212|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14394 fis, clone HEMBA1003235, weakly similar to
           TROPOMYOSIN. ).
          Length = 212

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 85  KENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRRE 246
           KE     L ++K++LDT     KE  E+A   I  ++ +     K ++E  +RE
Sbjct: 91  KEKAEKKLMSIKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKRE 144


>BC060803-1|AAH60803.1|  715|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 715

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 85  KENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRRE 246
           KE     L ++K++LDT     KE  E+A   I  ++ +     K ++E  +RE
Sbjct: 594 KEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKRE 647


>AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 85  KENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRRE 246
           KE     L ++K++LDT     KE  E+A   I  ++ +     K ++E  +RE
Sbjct: 601 KEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKRE 654


>AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 85  KENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRRE 246
           KE     L ++K++LDT     KE  E+A   I  ++ +     K ++E  +RE
Sbjct: 601 KEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKRE 654


>AK026958-1|BAB15602.1|  715|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23305 fis, clone HEP11392. ).
          Length = 715

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 85  KENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRRE 246
           KE     L ++K++LDT     KE  E+A   I  ++ +     K ++E  +RE
Sbjct: 594 KEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKRE 647


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,585,398
Number of Sequences: 237096
Number of extensions: 1966271
Number of successful extensions: 8363
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8363
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)