Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1499
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p pro...    63   4e-10
AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA...    63   4e-10
AY058243-1|AAL13472.1|  470|Drosophila melanogaster GH01077p pro...    32   0.60 
AE014297-1916|AAN13622.1|  470|Drosophila melanogaster CG3731-PB...    32   0.60 
AE014297-1915|AAF55110.2|  470|Drosophila melanogaster CG3731-PA...    32   0.60 

>AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p
           protein.
          Length = 440

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = +3

Query: 255 RSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSN 434
           R A GL+T+N ++F I R + Q+G  ++  GDRE + YT+  T D     L  L +L+  
Sbjct: 78  RLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL-Q 136

Query: 435 QEFRPWELNDNA 470
             F+PWEL DNA
Sbjct: 137 PAFKPWELVDNA 148



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/77 (36%), Positives = 35/77 (45%)
 Frame = +1

Query: 25  MASKTLVAPFIRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFK 204
           MA        +R +  RGYA     V     +   VL NK  VA  D   PV+RV++   
Sbjct: 1   MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLG 60

Query: 205 AGSRYEPQAELGLSHVL 255
           AGSR E     G SH+L
Sbjct: 61  AGSRNESYDIQGASHLL 77



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +2

Query: 500 TTPIRAVDLLHKAAYRRGLGXXLFISPKRINDISSESLQLFASQ 631
           +T  RA++L+HKAA+R GLG  ++    ++  +SSESL  + +Q
Sbjct: 159 STEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQ 202


>AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA
           protein.
          Length = 440

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = +3

Query: 255 RSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSN 434
           R A GL+T+N ++F I R + Q+G  ++  GDRE + YT+  T D     L  L +L+  
Sbjct: 78  RLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL-Q 136

Query: 435 QEFRPWELNDNA 470
             F+PWEL DNA
Sbjct: 137 PAFKPWELVDNA 148



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/77 (36%), Positives = 35/77 (45%)
 Frame = +1

Query: 25  MASKTLVAPFIRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFK 204
           MA        +R +  RGYA     V     +   VL NK  VA  D   PV+RV++   
Sbjct: 1   MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLG 60

Query: 205 AGSRYEPQAELGLSHVL 255
           AGSR E     G SH+L
Sbjct: 61  AGSRNESYDIQGASHLL 77



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +2

Query: 500 TTPIRAVDLLHKAAYRRGLGXXLFISPKRINDISSESLQLFASQ 631
           +T  RA++L+HKAA+R GLG  ++    ++  +SSESL  + +Q
Sbjct: 159 STEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQ 202


>AY058243-1|AAL13472.1|  470|Drosophila melanogaster GH01077p
           protein.
          Length = 470

 Score = 32.3 bits (70), Expect = 0.60
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +1

Query: 52  FIRHVT-IRGYAQAAPAVKKDVRI---QSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRY 219
           F+R V  I+ Y  AA   K  + I   Q + L N   VA+ D+G+    V +   AGSR 
Sbjct: 15  FMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRS 74

Query: 220 EPQAELGLSHVLDQL 264
           E +   G++H L+ +
Sbjct: 75  ENEKNNGVAHFLEHM 89


>AE014297-1916|AAN13622.1|  470|Drosophila melanogaster CG3731-PB,
           isoform B protein.
          Length = 470

 Score = 32.3 bits (70), Expect = 0.60
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +1

Query: 52  FIRHVT-IRGYAQAAPAVKKDVRI---QSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRY 219
           F+R V  I+ Y  AA   K  + I   Q + L N   VA+ D+G+    V +   AGSR 
Sbjct: 15  FMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRS 74

Query: 220 EPQAELGLSHVLDQL 264
           E +   G++H L+ +
Sbjct: 75  ENEKNNGVAHFLEHM 89


>AE014297-1915|AAF55110.2|  470|Drosophila melanogaster CG3731-PA,
           isoform A protein.
          Length = 470

 Score = 32.3 bits (70), Expect = 0.60
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +1

Query: 52  FIRHVT-IRGYAQAAPAVKKDVRI---QSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRY 219
           F+R V  I+ Y  AA   K  + I   Q + L N   VA+ D+G+    V +   AGSR 
Sbjct: 15  FMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRS 74

Query: 220 EPQAELGLSHVLDQL 264
           E +   G++H L+ +
Sbjct: 75  ENEKNNGVAHFLEHM 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,257,061
Number of Sequences: 53049
Number of extensions: 602936
Number of successful extensions: 1167
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)