Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1499
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 41 9e-04
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 41 9e-04
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 40 0.002
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 35 0.059
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 33 0.14
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 32 0.31
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 29 3.9
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 133 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 255
L N V +D+ P+ + +AF+AGSRYE + GLSH +
Sbjct: 27 LGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHTI 67
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 237 GIVACTRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 416
G+ R+ G T+ + LSQ G + + R+ +L ++ + L +L
Sbjct: 62 GLSHTIRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSRDLFGVSLTIPRESTSVGLSVL 121
Query: 417 NNLVSNQEFRPWELNDNAPRLKYD 488
+ N F+PWE+ D P ++ D
Sbjct: 122 GQVAGNPGFKPWEVEDVLPTMRAD 145
Score = 34.3 bits (75), Expect = 0.078
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 518 VDLLHKAAYRR-GLGXXLFISPKRINDISSESLQLFASQN 634
VD +HKAAYR GLG ++ +I I + +L FA Q+
Sbjct: 156 VDQIHKAAYRNGGLGNSIYAPCSKIGSICTSTLSSFAEQH 195
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +1
Query: 88 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 29 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 84
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +3
Query: 237 GIVACTRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 416
G+ R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 79 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 138
Query: 417 NNLVSNQEFRPWELND 464
L N F+PW++ D
Sbjct: 139 GQL-GNNAFKPWDVED 153
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +1
Query: 88 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 15 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +3
Query: 237 GIVACTRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 416
G+ R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 65 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 124
Query: 417 NNLVSNQEFRPWELND 464
L N F+PW++ D
Sbjct: 125 GQL-GNNAFKPWDVED 139
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +1
Query: 88 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 29 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 84
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +3
Query: 237 GIVACTRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 416
G+ R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 79 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 138
Query: 417 NNLVSNQEFRPWELND 464
L N F+PW++ D
Sbjct: 139 GQL-GNNAFKPWDVED 153
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +1
Query: 88 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 15 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +3
Query: 237 GIVACTRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 416
G+ R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 65 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 124
Query: 417 NNLVSNQEFRPWELND 464
L N F+PW++ D
Sbjct: 125 GQL-GNNAFKPWDVED 139
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/90 (23%), Positives = 40/90 (44%)
Frame = +3
Query: 237 GIVACTRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 416
G+V R+ G ++ + + GA +++ R+ + +D+ AL IL
Sbjct: 61 GLVHHVRNFVGRDAQSYPGLQLVWSSAASGANLNSFATRDIFGVQISVARDQAAYALSIL 120
Query: 417 NNLVSNQEFRPWELNDNAPRLKYDIISLPP 506
++ + F+PWEL D P + D+ P
Sbjct: 121 GHVAAKPAFKPWELEDVTPTILADLSQKTP 150
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 88 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 249
AA +K + L N V + +N ++++ +AF+AGSRYE + GL H
Sbjct: 11 AAIKTQKPTGSLKTKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVH 64
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.059
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 25 MASKTLVAPFIRHVTIRGYAQAAPAVK-KDV-----RIQSSVLPNKTFVAALDNGSPVTR 186
MA + V+ +R A+ AV KDV + + + L N V DNGS
Sbjct: 1 MALRLAVSSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATAT 60
Query: 187 VTIAFKAGSRYEPQAELGLSHVLDQLL 267
V + + GSR+E + G++H L++L+
Sbjct: 61 VGVWIETGSRFENEKNNGVAHFLERLI 87
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +1
Query: 13 KLTKMASKTLVAPFIRHVTIRGYAQAAP-AVKKDVRIQ---SSVLPNKTFVAALDNGSPV 180
KLT + SK L+ P H T + P VK +Q ++ LP + +V++ N P+
Sbjct: 1030 KLTVLESKKLIKPIKAHTTPTAASNTTPIPVKTTTTLQTTTATTLP-ENYVSSSTN-RPL 1087
Query: 181 TRVTIAFKAGSRYEPQAEL 237
T + I+ K GS P ++
Sbjct: 1088 TPIIISMKLGSTSSPSPQI 1106
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 127 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLDQL 264
+ LPN VA + G + + AGSRYE + G +H L+ +
Sbjct: 33 TTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHM 78
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 133 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLDQL 264
LPN V D V +A ++G RYE G+S ++++L
Sbjct: 24 LPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKL 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,063
Number of Sequences: 27780
Number of extensions: 304408
Number of successful extensions: 680
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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