Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1498
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    29   0.11 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    27   0.44 
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    26   1.3  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    26   1.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.8  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   2.3  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    24   4.1  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 412 ARLAAMSEKEREQEIFKRIERRDLMKTRWEIE 507
           ARL +  E +REQE+ +R+E +   + R ++E
Sbjct: 156 ARLESQQELQREQELLRRMESQQRQEQRQQLE 187


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 245  TRKTLKVLDRRRKKIPSVSQRKVKYLHIR 331
            +RKTL VLD RRK +    QRK++   IR
Sbjct: 1110 SRKTLNVLDTRRKSM--AEQRKIRKSIIR 1136


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 191 KQASSDEESKETEPKRSETRKTLKVLDRRRKKIPSV 298
           K A   ++S E++    E+   + V DRR+K  P+V
Sbjct: 12  KGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNV 47


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 191 KQASSDEESKETEPKRSETRKTLKVLDRRRKKIPSV 298
           K A   ++S E++    E+   + V DRR+K  P+V
Sbjct: 12  KGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNV 47


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 382 ENLMGDEEDRARLAAMSEKEREQEIFKRIERRDLMK 489
           E  + D+ED       +E  + QEI K  E+ +LMK
Sbjct: 849 ERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMK 884


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 400 EEDRARLA--AMSEKEREQEIFKRIERRDLMKTRWEIE 507
           EE+RAR A  A  E+E+E+E+ ++ ER    K + E E
Sbjct: 454 EEERAREAREAAIEREKERELREQREREQREKEQREKE 491


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +3

Query: 93  KNLITLSHQHHRLILIQTVTPKAMHPRAETRLRSRLPQMKSRRRQSQR 236
           K+++ +  +  R++++   +PKA    A+T+ +  L Q+K  +  S R
Sbjct: 281 KSVLPVVEEVKRVVMLFKKSPKASQMLADTQKKLNLDQLKMIQEVSTR 328


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 379 DENLMGDEEDRARLAAMSEKEREQEI 456
           +E+   DE + ARL A   +ER+QE+
Sbjct: 101 EESEESDELEEARLVAEELEERQQEL 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,031
Number of Sequences: 2352
Number of extensions: 6889
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)