Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1487
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.5  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    24   1.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.5  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   4.7  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 567 FANNITVVTFAIITFANTGPD 629
           FA  I VVTF +  F NT  D
Sbjct: 3   FALAILVVTFVVAVFGNTNLD 23


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 567 FANNITVVTFAIITFANTGPD 629
           FA  I VVTF +  F NT  D
Sbjct: 4   FALAILVVTFVVAVFGNTNLD 24


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 567 FANNITVVTFAIITFANTGPD 629
           FA  I VVTF +  F NT  D
Sbjct: 4   FALAILVVTFVVAVFGNTNLD 24


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 188  NFHIYLPFKPSLD 226
            N H+Y P K SLD
Sbjct: 998  NLHVYAPLKISLD 1010


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
          dehydrogenase/reductase protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 67 VEALRSLPGQLVP 29
          VE L+S PG+LVP
Sbjct: 48 VEELKSKPGKLVP 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,174
Number of Sequences: 438
Number of extensions: 3003
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)