Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1483
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   134   6e-34
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   133   1e-33
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    89   2e-20
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   0.91 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   0.91 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   0.91 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   0.91 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.9  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   8.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   8.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.5  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  134 bits (324), Expect = 6e-34
 Identities = 61/71 (85%), Positives = 65/71 (91%)
 Frame = +3

Query: 9   DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 188
           DCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPL
Sbjct: 362 DCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPL 421

Query: 189 GRFAVPDMRHT 221
           GRFAV DMR T
Sbjct: 422 GRFAVRDMRQT 432


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  133 bits (321), Expect = 1e-33
 Identities = 60/71 (84%), Positives = 64/71 (90%)
 Frame = +3

Query: 9   DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 188
           DCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPL
Sbjct: 362 DCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPL 421

Query: 189 GRFAVPDMRHT 221
           GRFAV DMR T
Sbjct: 422 GRFAVRDMRQT 432


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 89.4 bits (212), Expect = 2e-20
 Identities = 41/47 (87%), Positives = 43/47 (91%)
 Frame = +3

Query: 9   DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 149
           DCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 73  DCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 360 KYRSCMKNCAVNSSSYFLPLVAFS 289
           K+  C+KN A   SSYF+  + F+
Sbjct: 94  KFYDCLKNSADTISSYFVGKMYFN 117


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 360 KYRSCMKNCAVNSSSYFLPLVAFS 289
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 360 KYRSCMKNCAVNSSSYFLPLVAFS 289
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = -3

Query: 282 LVTLPPPASEXTAPXRPREKVCASCQGQQNDRGVGIPGRTLHIEAWKV 139
           LVT+ P  +E  +  +  E + +      +DR + + G+ ++++ WK+
Sbjct: 271 LVTVEPILTERPSDRQRNEILLSDELDSVDDRTLRLKGQMIYMDNWKM 318


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 399 CSPFFLRNTFR*MKYRSCMKN 337
           C  FF R+  + ++YR C KN
Sbjct: 87  CKGFFRRSIQQKIQYRPCTKN 107


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 421 FYKAC--NVTLFYNLYKVIHNISETFCYDCKQSVNS*NKGSL 540
           FY  C   V L+YN++K + N +     + K ++     GS+
Sbjct: 352 FYIPCIIMVFLYYNIFKALRNRARKARANRKPNLGDIKPGSI 393


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 93  NPKSIKSGDAAIVNLVPSKPLC 158
           NP+    G   +V L PS P C
Sbjct: 66  NPEHKPPGPKDLVYLEPSPPFC 87


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 93  NPKSIKSGDAAIVNLVPSKPLC 158
           NP+    G   +V L PS P C
Sbjct: 67  NPEHKPPGPKDLVYLEPSPPFC 88


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 115 EMQPLSTWYLPSL 153
           +  P+  WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,021
Number of Sequences: 438
Number of extensions: 3247
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)