Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1475
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    29   0.046
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.7  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   3.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 28.7 bits (61), Expect = 0.046
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 308  VFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVI 460
            V Y K + + + +    YYA  F     T+ F  +H   GQFL  ++I +I
Sbjct: 1201 VNYKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFL-GYFIGLI 1250


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 132 KILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKK 245
           K +S    +S L+ D EYY   + YD E   D   NKK
Sbjct: 385 KGVSIMVPISGLHYDPEYYPDPEKYDPERFSDE--NKK 420


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 561 LCYVNFLQHFHIHKHFRVTSYGAGTTKP 478
           LC + F Q  ++++H RV  +GA +  P
Sbjct: 110 LCLLRFSQSGNLNRHMRV--HGAASMMP 135


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 561 LCYVNFLQHFHIHKHFRVTSYGAGTTKP 478
           LC + F Q  ++++H RV  +GA +  P
Sbjct: 366 LCLLRFSQSGNLNRHMRV--HGAASMMP 391


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 72   PKPSTIKTKNVDAVFVEKQKKILSFFQDVSQLNTDDE 182
            PKP     + ++    EK+ K+L+F    +Q   DDE
Sbjct: 1041 PKPDPNAVQKIEEKKPEKKDKVLTFLGANAQ---DDE 1074


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 72   PKPSTIKTKNVDAVFVEKQKKILSFFQDVSQLNTDDE 182
            PKP     + ++    EK+ K+L+F    +Q   DDE
Sbjct: 1041 PKPDPNAVQKIEEKKPEKKDKVLTFLGANAQ---DDE 1074


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 587 SGLMRPSCIFVT*IFCSTSIFINI 516
           +G+ RPS  F++     + IFI I
Sbjct: 482 NGMYRPSIYFISKTLAESPIFIII 505


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 587 SGLMRPSCIFVT*IFCSTSIFINI 516
           +G+ RPS  F++     + IFI I
Sbjct: 482 NGMYRPSIYFISKTLAESPIFIII 505


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,874
Number of Sequences: 336
Number of extensions: 3274
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)