Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1467
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     25   3.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.4  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   5.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.7  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.7  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 181 FILAKSNRWSEVWRRW 228
           +++ +S  WSEV RRW
Sbjct: 305 YMIHESGAWSEVHRRW 320


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 351 MVSQSPPIPASKLMATSLKKCVQSLPEKYAHSFPSVRNYIAKMENSMTH 497
           MV Q PP P S L   S+   + +    Y+HS  S    ++   +SM H
Sbjct: 616 MVPQPPP-PGSALGHPSIPTSLAAAAAAYSHSIAST---MSSYHSSMAH 660


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 432 FRVSFEHIFLKMSPLIY*LEWGVTG 358
           F++ FEH FL   P  + L W  TG
Sbjct: 164 FQLYFEHEFLGKVPSKHFLPWCTTG 188


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 397 HL*KNVFKAYPKSMHIRFHQCEIILQKW 480
           H  KNV      + ++R H+ ++IL KW
Sbjct: 45  HCKKNVDYPLRTNYNLRGHRSDVILVKW 72


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 306  NERVINYVLTNIFEDMVSQSPPIPASKLMATSLKKCVQSLPEKY 437
            N+R   Y   N  E+   +  P P+    A   +  V+SL E+Y
Sbjct: 1105 NDRTSLYSARNTSEEQRGRRHPTPSPPPRAVGRRAEVRSLGERY 1148


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 547 LQMRVYAYVESTIHQIQCVIEFSIFAI*FRTDGNECAYFSG 425
           L MRV    ++  H   CVI   +       + +EC  FSG
Sbjct: 789 LAMRVVRAYKTISHVAVCVIASMVPICLILAEDSECCSFSG 829


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,260
Number of Sequences: 2352
Number of extensions: 16136
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)