Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1467
         (752 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.        31   4.5  
BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.        31   4.5  
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.        31   4.5  
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac...    31   4.5  
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf...    31   4.5  
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf...    31   4.5  
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf...    31   4.5  
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf...    31   4.5  
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf...    31   4.5  
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf...    31   4.5  
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf...    31   4.5  
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf...    31   4.5  

>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
          Length = 1111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.
          Length = 1068

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
          Length = 1111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
           chloride-activated ATP-sensitive potassium channel
           protein.
          Length = 1135

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +1

Query: 103 NRIFLLERIMNRYGIPMTIDTFLLMQFILA-----KSNRWSEVWRRWDNLRKAGVVSMNV 267
           + IF + R +  +G+ +++    L + IL      K N W ++ R    L     V    
Sbjct: 93  SHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPF-- 150

Query: 268 YTITYTFWPSKVKMSVS*IMYLPTFLRIWLASHPPFQLVN 387
             I   FWPS   +      ++P FL  WLA H    ++N
Sbjct: 151 --IISIFWPSLRNL------FVPVFLNCWLAKHALENMIN 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,943,113
Number of Sequences: 237096
Number of extensions: 2175675
Number of successful extensions: 3193
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3193
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)