Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1459
(636 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 37 6e-04
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 34 0.004
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 33 0.010
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 33 0.010
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 33 0.010
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 33 0.010
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 28 0.28
CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein ... 27 0.66
AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate phospho... 26 1.1
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 2.7
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 2.7
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 24 3.5
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 24 3.5
EF492429-1|ABP35929.1| 155|Anopheles gambiae lysozyme i-2 protein. 23 6.1
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 6.1
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 23 6.1
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 6.1
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 23 8.1
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 8.1
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 23 8.1
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 36.7 bits (81), Expect = 6e-04
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 11/113 (9%)
Frame = +2
Query: 224 LQRAPRRRHLLCTCPPGYTGRNCETDVDECSGAAACLNGGRCVDAVNNYTCDCTATGYTG 403
LQ + RR L C G DE C + G C+ C C G+ G
Sbjct: 507 LQNSQNRRELFEQCVAPSVG-------DELRTGPICSDRGECICG----QCYCNP-GFEG 554
Query: 404 ARCETNVNECEE-DRALCG---HGVC-------YDTYGGFVCACQPATPGSTA 529
CE N EC D ++CG HG+C +D++ G C C T G A
Sbjct: 555 EHCECN--ECATIDGSICGGPDHGICTCGTCSCFDSWSGDNCECTTDTTGCKA 605
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYS-CDCPPGYHGTYCELEVSLD 185
C C ++G+NCE D A + A C G+ + C C + G +CE +
Sbjct: 583 CSCFDSWSGDNCECTT-DTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETKDGEQ 641
Query: 186 P-LC 194
P LC
Sbjct: 642 PALC 645
Score = 29.5 bits (63), Expect = 0.093
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 CHCTARYTGNNCEV--DAGDPCASAACRHGARCVEDGRGDYS-CDCPPGYHGTYCELE-- 173
C C + + N E+ P R G C + G C C PG+ G +CE
Sbjct: 503 CECNLQNSQNRRELFEQCVAPSVGDELRTGPICSDRGECICGQCYCNPGFEGEHCECNEC 562
Query: 174 VSLDPLCVAGPCRNNGSCSVPPGGDTYS 257
++D GP +C D++S
Sbjct: 563 ATIDGSICGGPDHGICTCGTCSCFDSWS 590
Score = 26.6 bits (56), Expect = 0.66
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Frame = +3
Query: 6 ECHCTARYTGNNCEVDA-----GDPCAS---AACRHG-ARCVEDGRGDYSCDCPPGYHGT 158
+C+C + G +CE + G C C G C + GD +C+C G
Sbjct: 545 QCYCNPGFEGEHCECNECATIDGSICGGPDHGICTCGTCSCFDSWSGD-NCECTTDTTG- 602
Query: 159 YCELEVSLDPLCVA-GPCRNNGSCS 230
C+ S D +C G C N G CS
Sbjct: 603 -CKAP-SNDAVCSGHGQC-NCGRCS 624
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.9 bits (74), Expect = 0.004
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Frame = +2
Query: 257 CTCPPGYTGRNCETDVDEC-SGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETNVNEC 433
C C P GR C +EC +G ++G C +C+C G A C+T +C
Sbjct: 909 CHCKPNVIGRTC----NECKNGYWNIVSGNGCE------SCNCDPIGSYNASCDTYSGDC 958
Query: 434 EEDRALCGH--GVCYDTYGGF------VCACQPATPGSTATGCRRVRQ 553
+ G C Y GF C C P+ GS + C + Q
Sbjct: 959 FCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPS--GSKGSQCNQYGQ 1004
Score = 31.5 bits (68), Expect = 0.023
Identities = 26/96 (27%), Positives = 33/96 (34%)
Frame = +2
Query: 257 CTCPPGYTGRNCETDVDECSGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETNVNECE 436
CTCP GY G+ CE+ A GG + V CDC + + E
Sbjct: 693 CTCPEGYLGQFCESCAPGYRHNPA--RGGPFMPCV---PCDCNK--------HAEICDSE 739
Query: 437 EDRALCGHGVCYDTYGGFVCACQPATPGSTATGCRR 544
R +C H DT G T C+R
Sbjct: 740 TGRCICQHNTAGDTCDQCAKGYYGNALGGTPYDCKR 775
Score = 31.1 bits (67), Expect = 0.031
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 15 CTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYSC-DCPPGYHGTYCEL 170
C Y GN D C C + C++ C +CP GY G CEL
Sbjct: 757 CAKGYYGNALGGTPYD-CKRCPCPNNGACMQMAGDTVICLECPVGYFGPRCEL 808
Score = 29.1 bits (62), Expect = 0.12
Identities = 28/89 (31%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Frame = +3
Query: 15 CTARYTGNNCEVDAGDPCASAAC-RHGARC-VEDGR--------GDYSCDCPPGYHGTYC 164
C Y N PC C +H C E GR GD C GY+G
Sbjct: 707 CAPGYRHNPARGGPFMPCVPCDCNKHAEICDSETGRCICQHNTAGDTCDQCAKGYYGNAL 766
Query: 165 ELEVSLDPLCVAGPCRNNGSCSVPPGGDT 251
D C PC NNG+C + GDT
Sbjct: 767 G-GTPYD--CKRCPCPNNGAC-MQMAGDT 791
Score = 28.7 bits (61), Expect = 0.16
Identities = 27/85 (31%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Frame = +2
Query: 263 CPPGYTGRNCETDVDECSGAAACLNGGRCVD-AVNNYTCDCTATGYTGARCETNVNECEE 439
C GY G +C C N G C+ A + C GY G RCE
Sbjct: 757 CAKGYYGNALGGTPYDCK-RCPCPNNGACMQMAGDTVICLECPVGYFGPRCE-------- 807
Query: 440 DRALCGHGVCYDTYG--GFVCACQP 508
LC G D G G V CQP
Sbjct: 808 ---LCSDGYYGDPTGVYGSVRMCQP 829
Score = 28.3 bits (60), Expect = 0.22
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYSCDCPP-GYHGTYCELEVSLD 185
CHC G C C++G + G G SC+C P G + C+ S D
Sbjct: 909 CHCKPNVIGRTCN----------ECKNGYWNIVSGNGCESCNCDPIGSYNASCD-TYSGD 957
Query: 186 PLCVAG 203
C G
Sbjct: 958 CFCKPG 963
Score = 26.2 bits (55), Expect = 0.87
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 129 CDCPPGYHGTYCE 167
C CP GY G +CE
Sbjct: 693 CTCPEGYLGQFCE 705
Score = 24.2 bits (50), Expect = 3.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 257 CTCPPGYTGRNCE 295
C C PG TG C+
Sbjct: 415 CQCKPGVTGEKCD 427
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYS-CDCPPGYHGTYCELEVSLD 185
C C ++G+NCE D A + A C G+ + C C + G +CE +
Sbjct: 7 CSCFDSWSGDNCECTT-DTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETKDGEQ 65
Query: 186 P-LC 194
P LC
Sbjct: 66 PALC 69
Score = 31.9 bits (69), Expect = 0.018
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 257 CTCPPGYTGRNCE--TDVDEC---SGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETN 421
C+C ++G NCE TD C S A C G+C N C C + + G CET
Sbjct: 7 CSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDES-FFGPFCETK 61
Query: 422 VNE 430
E
Sbjct: 62 DGE 64
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 452 CGHGVCYDTYGGFVCACQPATPGSTA 529
CG C+D++ G C C T G A
Sbjct: 4 CGTCSCFDSWSGDNCECTTDTTGCKA 29
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYS-CDCPPGYHGTYCELEVSLD 185
C C ++G+NCE D A + A C G+ + C C + G +CE +
Sbjct: 7 CSCFDSWSGDNCECTT-DTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETKDGEQ 65
Query: 186 P-LC 194
P LC
Sbjct: 66 PALC 69
Score = 31.9 bits (69), Expect = 0.018
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 257 CTCPPGYTGRNCE--TDVDEC---SGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETN 421
C+C ++G NCE TD C S A C G+C N C C + + G CET
Sbjct: 7 CSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDES-FFGPFCETK 61
Query: 422 VNE 430
E
Sbjct: 62 DGE 64
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 452 CGHGVCYDTYGGFVCACQPATPGSTA 529
CG C+D++ G C C T G A
Sbjct: 4 CGTCSCFDSWSGDNCECTTDTTGCKA 29
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYS-CDCPPGYHGTYCELEVSLD 185
C C ++G+NCE D A + A C G+ + C C + G +CE +
Sbjct: 7 CSCFDSWSGDNCECTT-DTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETKDGEQ 65
Query: 186 P-LC 194
P LC
Sbjct: 66 PALC 69
Score = 31.9 bits (69), Expect = 0.018
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 257 CTCPPGYTGRNCE--TDVDEC---SGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETN 421
C+C ++G NCE TD C S A C G+C N C C + + G CET
Sbjct: 7 CSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDES-FFGPFCETK 61
Query: 422 VNE 430
E
Sbjct: 62 DGE 64
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 452 CGHGVCYDTYGGFVCACQPATPGSTA 529
CG C+D++ G C C T G A
Sbjct: 4 CGTCSCFDSWSGDNCECTTDTTGCKA 29
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYS-CDCPPGYHGTYCELEVSLD 185
C C ++G+NCE D A + A C G+ + C C + G +CE +
Sbjct: 7 CSCFDSWSGDNCECTT-DTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETKDGEQ 65
Query: 186 P-LC 194
P LC
Sbjct: 66 PALC 69
Score = 31.9 bits (69), Expect = 0.018
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 257 CTCPPGYTGRNCE--TDVDEC---SGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETN 421
C+C ++G NCE TD C S A C G+C N C C + + G CET
Sbjct: 7 CSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQC----NCGRCSCDES-FFGPFCETK 61
Query: 422 VNE 430
E
Sbjct: 62 DGE 64
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 452 CGHGVCYDTYGGFVCACQPATPGSTA 529
CG C+D++ G C C T G A
Sbjct: 4 CGTCSCFDSWSGDNCECTTDTTGCKA 29
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 27.9 bits (59), Expect = 0.28
Identities = 29/91 (31%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Frame = +3
Query: 9 CHCTARYTGNNCEVDAG----DPCASAACRHGARCVE-DGRGDYSCDCPPGYHGTYCELE 173
C C Y G CE A +P ACR E GRG C CE
Sbjct: 523 CECDGTYHGQRCECSAMESLLEPGMVDACRMSNASEECSGRGQCVCGV------CVCERR 576
Query: 174 VSLDPLCVAGPCR-NNGSCSVPPGGDTYSAP 263
+ D L C +N SC PGG S P
Sbjct: 577 PNPDELIDGRYCECDNFSCD-RPGGLLCSGP 606
Score = 25.0 bits (52), Expect = 2.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 LCTCPPGYTGRNCETDVDECSGAAACLNGGRCVDA--VNNYTCDCTATGYTGARCETNVN 427
+C C Y G+ C ECS + L G VDA ++N + +C+ G +C V
Sbjct: 522 ICECDGTYHGQRC-----ECSAMESLLEPG-MVDACRMSNASEECSGRG----QCVCGVC 571
Query: 428 ECE 436
CE
Sbjct: 572 VCE 574
Score = 23.0 bits (47), Expect = 8.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 511 YTGEHCHRMSACASGPCGREGH 576
YTG +C + CA G C H
Sbjct: 666 YTGRYCEKCPTCA-GRCNEFKH 686
>CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein
protein.
Length = 227
Score = 26.6 bits (56), Expect = 0.66
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 108 DGRGDYSCDCPPGYHGTYCELEVSLDPLCVAGPCR 212
D D+ CDC PGY Y + S PL G C+
Sbjct: 75 DHDNDWVCDCRPGY--VYSPPQDSCYPLFQQGFCQ 107
>AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate
phosphoribosyltransferase-like protein protein.
Length = 519
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 489 NPPYVS*HTPCPHSARSSSHSFTLVSQRAPVYPV 388
NPP V C H + S ++ + +Q P+Y V
Sbjct: 419 NPPEVGQKVLCRHPFQESKRAYVIPTQVEPLYRV 452
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.6 bits (51), Expect = 2.7
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 377 DCTATGYTGARCETNVNECEEDRALC 454
DC G C T V C +D LC
Sbjct: 866 DCNREEVVGVVCRTPVMSCPQDYWLC 891
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 24.6 bits (51), Expect = 2.7
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 377 DCTATGYTGARCETNVNECEEDRALC 454
DC G C T V C +D LC
Sbjct: 866 DCNREEVVGVVCRTPVMSCPQDYWLC 891
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 24.2 bits (50), Expect = 3.5
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +3
Query: 99 CVEDGRGDYSCDCPPGYHGTYCELEV----SLDPLCVAGP 206
C G G PG+ T ELE+ S P VAGP
Sbjct: 24 CCPAGTGLNGSGTEPGWSATSAELEIAWRESSPPTLVAGP 63
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 24.2 bits (50), Expect = 3.5
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +2
Query: 230 RAPRRRHLLCTCPPGYTGRNCETDVDECSGAAACLNGGRCV 352
R R H+ TC + C D+ A+ C N +C+
Sbjct: 468 RCLERGHIAATCTGEDRSKRCLRCGDQTHKASGCTNEVKCM 508
>EF492429-1|ABP35929.1| 155|Anopheles gambiae lysozyme i-2 protein.
Length = 155
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 488 FVCACQPATPGSTATGCRR 544
F C C +T ST+T CR+
Sbjct: 30 FRCICDASTGCSTSTTCRQ 48
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 247 SPPGGTLQLPLFRHGPATHSGSRDTSSSQY 158
SP GGT +P+ PA+ S+ ++ S Y
Sbjct: 842 SPSGGTTPVPVSLLSPASSHYSQRSARSPY 871
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -3
Query: 244 PPGGTLQLPLFRHGPATHSGSRDTSSSQYV 155
PP G P+F P GS + +YV
Sbjct: 286 PPAGRCFQPIFFRSPVNFVGSGKVEAVEYV 315
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.4 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 586 SSTHAPPVRTVLTHTPT 536
SS+H P ++++HTP+
Sbjct: 1346 SSSHGGPTPSIISHTPS 1362
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 23.0 bits (47), Expect = 8.1
Identities = 10/12 (83%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
Frame = +3
Query: 210 RNNGSCS-VPPG 242
RNNGSC VPPG
Sbjct: 114 RNNGSCLYVPPG 125
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.0 bits (47), Expect = 8.1
Identities = 10/12 (83%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
Frame = +3
Query: 210 RNNGSCS-VPPG 242
RNNGSC VPPG
Sbjct: 146 RNNGSCLYVPPG 157
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 23.0 bits (47), Expect = 8.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 543 RRHPVAVLPGVAGWHAHTNPPYV 475
++HP +V P A H TN P V
Sbjct: 70 QQHPPSVFPHAALPHTPTNQPIV 92
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,493
Number of Sequences: 2352
Number of extensions: 12348
Number of successful extensions: 89
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -