Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1458
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 142 3e-34
03_01_0547 + 4093196-4093657,4094267-4095148 142 3e-34
03_01_0544 + 4082528-4082989,4083585-4084466 142 3e-34
03_01_0543 + 4076981-4077442,4078145-4079026 142 3e-34
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 50 2e-06
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 47 2e-05
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 47 2e-05
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 41 0.001
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 36 0.029
02_04_0462 + 23131433-23132836 35 0.066
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 32 0.61
11_06_0516 + 24502645-24504507 29 4.3
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 5.7
08_02_0444 - 17209447-17209491,17210559-17210849,17211655-172116... 29 5.7
06_03_1165 - 28106604-28106915 28 7.6
10_08_0947 + 21749062-21749411,21750471-21750759 28 10.0
04_04_0511 - 25800371-25800454,25800563-25800629,25800903-258010... 28 10.0
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 142 bits (344), Expect = 3e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K
Sbjct: 265 VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKE 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA FT+QVI++NHPGQI NGY PV
Sbjct: 325 AASFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 2e-29
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK V K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKNVEKKD 433
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 142 bits (344), Expect = 3e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K
Sbjct: 265 VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKE 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA FT+QVI++NHPGQI NGY PV
Sbjct: 325 AASFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 2e-29
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK V K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKNVEKKD 433
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 142 bits (344), Expect = 3e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K
Sbjct: 265 VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKE 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA FT+QVI++NHPGQI NGY PV
Sbjct: 325 AASFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 2e-29
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK V K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKNVEKKD 433
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 142 bits (344), Expect = 3e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K
Sbjct: 265 VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKE 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA FT+QVI++NHPGQI NGY PV
Sbjct: 325 AASFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 2e-29
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK V K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKNVEKKD 433
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -2
Query: 487 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 308
++ +I ++++TGK+++ P+ + S A++ + K +CVE F LGR +R
Sbjct: 577 VSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLR 636
Query: 307 DMRQTVAVGVIKAV 266
T+AVG++ V
Sbjct: 637 SQGNTIAVGIVSRV 650
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -2
Query: 508 LDCHTAHI--ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEF 335
++ H H+ A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 593 VEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKC 651
Query: 334 PPLGRFAVRDMRQTVAVGVI 275
LGR +R T+AVGV+
Sbjct: 652 RALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -2
Query: 508 LDCHTAHI--ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEF 335
++ H H+ A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 593 VEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKC 651
Query: 334 PPLGRFAVRDMRQTVAVGVI 275
LGR +R T+AVGV+
Sbjct: 652 RALGRAFLRSSGSTIAVGVV 671
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-------IKSGDAAIVNLVPSKPLCVE 350
L H+ C+ ++ E++D + K + K +K+G + + + +C+E
Sbjct: 342 LHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIE 401
Query: 349 SFQEFPPLGRFAVR 308
+F +FP LGRF +R
Sbjct: 402 NFSDFPQLGRFTLR 415
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 744 PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 565
P +V + + ++ A P +NV + + +++ G+V S NP +F
Sbjct: 262 PNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFN 320
Query: 564 AQVIVL 547
AQ+ +L
Sbjct: 321 AQLQIL 326
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 36.3 bits (80), Expect = 0.029
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 744 PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 565
P +V SV + ++ A PG+NV + + ++ G+V K NP ++F
Sbjct: 217 PNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFR 275
Query: 564 AQVIVL 547
AQ+ +L
Sbjct: 276 AQLQIL 281
>02_04_0462 + 23131433-23132836
Length = 467
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -3
Query: 723 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 544
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 543 HPGQIS---NGYTP 511
G+ S GY P
Sbjct: 384 EGGRHSPFFPGYRP 397
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -3
Query: 735 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 556
+ T V VEM + L GDNVG ++ + +++RG V K K F A++
Sbjct: 311 LKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEI 368
Query: 555 IVL 547
VL
Sbjct: 369 YVL 371
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 714 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 535
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 534 QISNG 520
+I G
Sbjct: 170 EIRRG 174
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 57 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 137
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>08_02_0444 -
17209447-17209491,17210559-17210849,17211655-17211672,
17211798-17211969,17212523-17212630,17212940-17213382
Length = 358
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 801 ARRQS*NWCVETRPIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 634
AR+ + N +E P F P + + + E HE +A GD VG + K K
Sbjct: 212 ARQDAINVALERNP-AAFMPKVLNSTAHNCEFVHEQKSKAAEGDIVGKHTKGCKCK 266
>06_03_1165 - 28106604-28106915
Length = 103
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 724 SQVCGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 608
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>10_08_0947 + 21749062-21749411,21750471-21750759
Length = 212
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 392 SHCQLGTFQASMCRVLPGIPTPRSFCCP*HEADSCCRSHQGCQLQ 258
S+C + + + P + PR CCP + D+ C Q Q Q
Sbjct: 159 SYCAVLQSEMTYLEQPPAVDLPRLHCCPSDQDDAGCHHKQQQQQQ 203
>04_04_0511 -
25800371-25800454,25800563-25800629,25800903-25801000,
25801094-25801152,25801247-25801379,25801461-25801532,
25801628-25801678,25802000-25802111,25802231-25802604
Length = 349
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 753 VFAPANITTEVKSVEMHHEAL-QEAVPGDNVGFNV-KNVSVKELRRGYVAGDSKNNPPKG 580
+F P+ + SV +H + E + GDN ++ +N + + G V + N P G
Sbjct: 34 LFVPSGTMANLISVLVHCDTRGSEVILGDNSHIHIYENGGISTI--GGVHPKTVRNNPDG 91
Query: 579 AADFTAQVIVLNHP 538
D V+ + HP
Sbjct: 92 TMDIDKIVVAIRHP 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,500,445
Number of Sequences: 37544
Number of extensions: 452288
Number of successful extensions: 1266
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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