Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1458
(803 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 173 2e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 164 7e-43
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 146 3e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 110 1e-26
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 173 bits (421), Expect = 2e-45
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG
Sbjct: 277 VVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 336
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AADFTAQVIVLNHPGQISNGYTPV
Sbjct: 337 AADFTAQVIVLNHPGQISNGYTPV 360
Score = 160 bits (389), Expect = 1e-41
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPP
Sbjct: 361 LDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPP 420
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIKAV FK+
Sbjct: 421 LGRFAVRDMRQTVAVGVIKAVTFKD 445
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1
Query: 803 VPVGRVETGV 774
VPVGRVETGV
Sbjct: 262 VPVGRVETGV 271
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 164 bits (399), Expect = 7e-43
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V FAPA +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+G
Sbjct: 277 LVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRG 336
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AADFTAQVIVLNHPGQISNGYTPV
Sbjct: 337 AADFTAQVIVLNHPGQISNGYTPV 360
Score = 160 bits (389), Expect = 1e-41
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPP
Sbjct: 361 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPP 420
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK+V FK+
Sbjct: 421 LGRFAVRDMRQTVAVGVIKSVTFKD 445
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 803 VPVGRVETGV 774
VPVGRVETG+
Sbjct: 262 VPVGRVETGI 271
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 146 bits (353), Expect = 3e-37
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -3
Query: 720 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 541
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 540 PGQISNGYTPV 508
PGQISNGYTPV
Sbjct: 61 PGQISNGYTPV 71
Score = 91.1 bits (216), Expect = 1e-20
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 365
LDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 72 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 110 bits (265), Expect = 1e-26
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 595
+V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 220 VVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1
Query: 803 VPVGRVETGV 774
VPVGRVETGV
Sbjct: 205 VPVGRVETGV 214
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 154 KYRSCMKNCAVNSSSYFLPLVAFS 225
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
Score = 22.2 bits (45), Expect = 5.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 296 DSCCRSHQGC 267
D+CCR+H C
Sbjct: 56 DACCRTHDMC 65
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 154 KYRSCMKNCAVNSSSYFLPLVAFS 225
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
Score = 22.2 bits (45), Expect = 5.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 296 DSCCRSHQGC 267
D+CCR+H C
Sbjct: 61 DACCRTHDMC 70
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 154 KYRSCMKNCAVNSSSYFLPLVAFS 225
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
Score = 22.2 bits (45), Expect = 5.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 296 DSCCRSHQGC 267
D+CCR+H C
Sbjct: 61 DACCRTHDMC 70
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 115 CSPFFLRNTFR*MKYRSCMKN 177
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 642 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 535
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,657
Number of Sequences: 438
Number of extensions: 4442
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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