Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1458
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 143 1e-34
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 143 1e-34
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 143 1e-34
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 143 1e-34
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 116 2e-26
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 58 5e-09
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 50 2e-06
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 35 0.073
At4g27900.2 68417.m04005 expressed protein 32 0.51
At4g27900.1 68417.m04004 expressed protein 32 0.51
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 32 0.51
At4g37520.1 68417.m05308 peroxidase 50 (PER50) (P50) (PRXR2) ide... 30 2.1
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 30 2.1
At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing prote... 28 6.3
At5g42860.1 68418.m05224 expressed protein 25 7.4
At1g19430.1 68414.m02421 dehydration-responsive protein-related ... 28 8.3
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 62/84 (73%), Positives = 76/84 (90%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KG
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKG 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA+FT+QVI++NHPGQI NGY PV
Sbjct: 325 AANFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 1e-29
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK+V+ K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKSVDKKD 433
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 62/84 (73%), Positives = 76/84 (90%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KG
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKG 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA+FT+QVI++NHPGQI NGY PV
Sbjct: 325 AANFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 1e-29
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK+V+ K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKSVDKKD 433
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 62/84 (73%), Positives = 76/84 (90%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KG
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKG 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA+FT+QVI++NHPGQI NGY PV
Sbjct: 325 AANFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 1e-29
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK+V+ K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKSVDKKD 433
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 62/84 (73%), Positives = 76/84 (90%)
Frame = -3
Query: 759 IVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKG 580
+V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KG
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKG 324
Query: 579 AADFTAQVIVLNHPGQISNGYTPV 508
AA+FT+QVI++NHPGQI NGY PV
Sbjct: 325 AANFTSQVIIMNHPGQIGNGYAPV 348
Score = 126 bits (305), Expect = 1e-29
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PP
Sbjct: 349 LDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPP 408
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFAVRDMRQTVAVGVIK+V+ K+
Sbjct: 409 LGRFAVRDMRQTVAVGVIKSVDKKD 433
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 116 bits (279), Expect = 2e-26
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
LDCHT+HIA KF+EI K+D RTG E PK +K+ +AAI+N+ P+KP+ VE++ +PP
Sbjct: 15 LDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTPTKPMVVEAYSAYPP 74
Query: 328 LGRFAVRDMRQTVAVGVIKAVNFKE 254
LGRFA+RDMRQTV VGVIK+V K+
Sbjct: 75 LGRFAIRDMRQTVGVGVIKSVVKKD 99
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 549 LNHPGQISNGYTPV 508
+NH GQI NGYTPV
Sbjct: 1 MNHLGQIKNGYTPV 14
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = -2
Query: 508 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 329
L H C+ E+K ++D +T K + +K+G A + + + +C+E F +FP
Sbjct: 445 LHIHAVVEECEIIELKSQIDLKTRKPMKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFPQ 504
Query: 328 LGRFAVRDMRQTVAVGVI 275
LGRF +R +T+AVG +
Sbjct: 505 LGRFTLRTEGKTIAVGKV 522
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = -3
Query: 756 VVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGA 577
+V P +V ++ + ++ A PG+N+ + + +++ G+V S NP
Sbjct: 361 LVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVL-SSIVNPVPAV 419
Query: 576 ADFTAQVIVL 547
+F AQ+ +L
Sbjct: 420 TEFVAQLQIL 429
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = -2
Query: 520 LHTSLDCHTAHI--ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVES 347
L + L+ H H A ++ +D +TG+ T+ +P+ + + +A++ + P+CVE+
Sbjct: 577 LGSQLEFHVHHAKEAATVVKLVAMLDPKTGQPTKKSPRCLTAKQSAMLEVSLQNPVCVET 636
Query: 346 FQEFPPLGRFAVRDMRQTVAVGVIKAV 266
F E LGR +R +TVA+G + +
Sbjct: 637 FSESRALGRVFLRSSGRTVAMGKVTRI 663
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 723 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 613
V VEM + L EA+ GDNVG ++ + +++RG V
Sbjct: 333 VTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMV 369
>At4g27900.2 68417.m04005 expressed protein
Length = 261
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 418 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 326
PKS+ SG+ + +++V K ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174
>At4g27900.1 68417.m04004 expressed protein
Length = 261
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 418 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 326
PKS+ SG+ + +++V K ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 735 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 556
+ + V VEM + L GDNVG ++ + ++++RG V +K K F A++
Sbjct: 312 LKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEI 369
Query: 555 IVL 547
VL
Sbjct: 370 YVL 372
>At4g37520.1 68417.m05308 peroxidase 50 (PER50) (P50) (PRXR2)
identical to SP|Q43731 Peroxidase 50 precursor (EC
1.11.1.7) (Atperox P50) (PRXR2) (ATP9a)] {Arabidopsis
thaliana}
Length = 329
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 572 ILQLKSLCLTILVKSQTVTHQFGLPHCPHCLQICRN 465
+L L SLCLT+ + S + F CP+ QI RN
Sbjct: 10 LLLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRN 45
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 613 NITTTQFLDGHVLYVETYIVSRYSFLESFVVHLHRLDFSSDVGGGKDNNGPGF 771
N+ +F + H L + ++++S + + ++F + GG NNGP F
Sbjct: 184 NVQHDEFYEQHNLSMSSFLLSTSRTVSIDFISSPEVNFFRKIAGGFGNNGPSF 236
>At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing protein
similar to cell death suppressor protein lls1 from Zea
mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
[2Fe-2S] domain
Length = 536
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 478 KFAEIKEKVDRRTGKSTEVNPKSI 407
+F + KEK+DR GK E+N K +
Sbjct: 258 RFPKPKEKIDREGGKPLEINVKKL 281
>At5g42860.1 68418.m05224 expressed protein
Length = 320
Score = 25.0 bits (52), Expect(2) = 7.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 225 RKGHQGQEVARAVNSTIFHTTAILHSPKGVSKEKRATNS 109
R H G++ A T FH+T +L SP G +++S
Sbjct: 33 RDSHDGEKTA-----TSFHSTPVLTSPMGSPPHSHSSSS 66
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 369 PSLYV*SPSRNSH 331
P+ +V SPSR+SH
Sbjct: 24 PAYFVQSPSRDSH 36
>At1g19430.1 68414.m02421 dehydration-responsive protein-related low
similarity to early-responsive to dehydration stress
ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 724
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 783 NWCVETRPIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 643
NW ET + F P N TT +V + E +QE VP G NV+ V
Sbjct: 302 NWVNETGEYLSF-PQNQTTFNGNVLQYLEFIQEMVPDIEWGKNVRIV 347
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,308,284
Number of Sequences: 28952
Number of extensions: 363050
Number of successful extensions: 1052
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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