Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1457
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013151-1|AAH13151.1|  347|Homo sapiens IQ motif containing D p...    31   4.3  
AK127152-1|BAC86856.1|  327|Homo sapiens protein ( Homo sapiens ...    31   4.3  
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.              31   5.7  

>BC013151-1|AAH13151.1|  347|Homo sapiens IQ motif containing D
           protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 79  VELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLI 243
           +EL   S+SP  Q ++D   N +     +    + L+ ++QG+ +  QN +++LI
Sbjct: 134 IELQKSSLSPLMQQIKDSTKNVLRLLLSNPQAARLLQMQTQGRSAEAQNFIDSLI 188


>AK127152-1|BAC86856.1|  327|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45209 fis, clone BRCAN2015757. ).
          Length = 327

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 79  VELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLI 243
           +EL   S+SP  Q ++D   N +     +    + L+ ++QG+ +  QN +++LI
Sbjct: 134 IELQKSSLSPLMQQIKDSTKNVLRLLLSNPQAARLLQMQTQGRSAEAQNFIDSLI 188


>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
          Length = 2448

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +2

Query: 29   NFSLCSQCACSLPAPASWNYPRTA*ALLTKTSRTNCTTASSPVTT--TVLYVRAWNTRAK 202
            N+ +  QC   LP   S +  +T     +KT+ T  + +S+P +T  TV    A  T A 
Sbjct: 1468 NYQIRVQCCTPLPCSTSSSPAQTTPPTTSKTTETRASGSSAPSSTPGTVSLSTARTTPAP 1527

Query: 203  ARAASFK 223
              A S K
Sbjct: 1528 GTATSVK 1534


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,232,700
Number of Sequences: 237096
Number of extensions: 2105089
Number of successful extensions: 4283
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4283
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)