Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1457
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p pro...    30   2.9  
AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA...    30   2.9  
BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p pro...    29   5.0  
AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB...    29   5.0  
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro...    29   8.8  
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA...    29   8.8  

>BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 473 QLEVHYLVGEQQVYFKAHNTKYNQ 544
           Q + HY   E+ VYF++HN  Y+Q
Sbjct: 306 QQQSHYRHNEETVYFRSHNNAYHQ 329


>AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 473 QLEVHYLVGEQQVYFKAHNTKYNQ 544
           Q + HY   E+ VYF++HN  Y+Q
Sbjct: 306 QQQSHYRHNEETVYFRSHNNAYHQ 329


>BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p
           protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 17/75 (22%), Positives = 38/75 (50%)
 Frame = +1

Query: 19  NKMKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYES 198
           N M+LL++   C +A+++ V  +       + QD +DKL  S    +     +K+ +++ 
Sbjct: 97  NLMELLIMINACKIASASRVTAV-IPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKF 155

Query: 199 QGQGSIVQNVVNNLI 243
           + +  I   +V N++
Sbjct: 156 RSRAPISAKLVANML 170


>AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB,
           isoform B protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 17/75 (22%), Positives = 38/75 (50%)
 Frame = +1

Query: 19  NKMKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYES 198
           N M+LL++   C +A+++ V  +       + QD +DKL  S    +     +K+ +++ 
Sbjct: 113 NLMELLIMINACKIASASRVTAV-IPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKF 171

Query: 199 QGQGSIVQNVVNNLI 243
           + +  I   +V N++
Sbjct: 172 RSRAPISAKLVANML 186


>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
          Length = 1486

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +1

Query: 94   DSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIIDKSGTPWST 273
            D+ S ++  L+  L NS + GD  S   +S    S    + +   +NN  ID S T  ++
Sbjct: 1141 DNSSLASFQLDQSLMNSTVNGDESSTFNESFSKLSHNNNNSISKHMNN--IDCSITSTTS 1198

Query: 274  ATS 282
             TS
Sbjct: 1199 TTS 1201


>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
            protein.
          Length = 1486

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +1

Query: 94   DSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIIDKSGTPWST 273
            D+ S ++  L+  L NS + GD  S   +S    S    + +   +NN  ID S T  ++
Sbjct: 1141 DNSSLASFQLDQSLMNSTVNGDESSTFNESFSKLSHNNNNSISKHMNN--IDCSITSTTS 1198

Query: 274  ATS 282
             TS
Sbjct: 1199 TTS 1201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,026,468
Number of Sequences: 53049
Number of extensions: 649265
Number of successful extensions: 2337
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)