Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1456
         (692 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g09920.1 68416.m01183 phosphatidylinositol-4-phosphate 5-kina...    31   0.73 
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina...    29   2.9  
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kina...    29   3.9  

>At3g09920.1 68416.m01183 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 815

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 454 KLNSIFFYKRDSLYFIQSSYKSSIKRLMIMLPLY 555
           K  S+FF  +D  + I++  KS +K L+ MLP Y
Sbjct: 493 KSGSVFFLSQDDRFMIKTLRKSEVKVLLRMLPDY 526


>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 769

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 454 KLNSIFFYKRDSLYFIQSSYKSSIKRLMIMLPLYSQN 564
           K  SIF+   D  + I++  +S +K L+ MLP Y ++
Sbjct: 444 KSGSIFYLSHDDRFVIKTLKRSELKVLLRMLPRYYEH 480


>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 454 KLNSIFFYKRDSLYFIQSSYKSSIKRLMIMLPLYSQN 564
           K  SIF+   D  + I++  KS ++ L+ MLP Y ++
Sbjct: 431 KSGSIFYLSHDDRFVIKTLKKSELQVLLRMLPKYYEH 467


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,467,372
Number of Sequences: 28952
Number of extensions: 158560
Number of successful extensions: 244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)