Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1453
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   4.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   7.8  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 604 RCLIENGPCT 633
           +CL++ GPCT
Sbjct: 47  KCLMDEGPCT 56


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 294  IVFY*LYCYFFRSNIKVVKVNFL 362
            I+F+ L C+  +SNI+++    L
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQIL 976


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 294  IVFY*LYCYFFRSNIKVVKVNFL 362
            I+F+ L C+  +SNI+++    L
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQIL 976


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 294  IVFY*LYCYFFRSNIKVVKVNFL 362
            I+F+ L C+  +SNI+++    L
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQIL 976


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 294  IVFY*LYCYFFRSNIKVVKVNFL 362
            I+F+ L C+  +SNI+++    L
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQIL 976


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 607 CLIENGPCT 633
           CL+E GPC+
Sbjct: 59  CLLEKGPCS 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,096
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)