Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1450
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    29   0.046
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.3  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   1.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   1.7  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.2  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 0.046
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 396 VYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRRRWSSPPRATC 542
           V+    +K+ FPL Q+  +D +R + + TE      + +++S    +TC
Sbjct: 133 VFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSVDIISTC 181


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
          protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 2  ALVLCGLLAAVSAAPQYY 55
          A++LC  L AVSAA   Y
Sbjct: 6  AVILCAFLVAVSAAENKY 23


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 429 PLKQKQPEDSKRPVAEPTETTSTNVSRRRWSSPPRA 536
           PL Q          ++P +       RR WSSPP A
Sbjct: 97  PLSQAPASQQSLDASDP-DAMGKWCPRREWSSPPDA 131


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 429 PLKQKQPEDSKRPVAEPTETTSTNVSRRRWSSPPRA 536
           PL Q          ++P +       RR WSSPP A
Sbjct: 253 PLSQAPASQQSLDASDP-DAMGKWCPRREWSSPPDA 287


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 158 EMQHLDNMMKELSLKFPSI-INEGRVEGD 241
           EM++L+ ++KE    +PS+ + E R+E D
Sbjct: 43  EMKYLEMVLKEAQRLYPSVPVIERRLEVD 71


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 614 YVVASTLSRSHWSSGLSPSRRQRPA 540
           Y+    L  S+W   LSP  RQ  A
Sbjct: 390 YMSTIDLRSSYWQIPLSPESRQYTA 414


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 QKQPEDSKRPVAEPTETTSTN 500
           Q  P  S  P + PT+ TST+
Sbjct: 72  QGAPSPSSTPSSLPTQRTSTS 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,348
Number of Sequences: 336
Number of extensions: 3342
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)