Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1445
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.4  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 63  YVCKALDXGGC 95
           YVCKA D G C
Sbjct: 72  YVCKAKDEGSC 82


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 63  YVCKALDXGGC 95
           YVCKA D G C
Sbjct: 72  YVCKAKDEGSC 82


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 649 IYIIMSPHHSIIRVFKIYTHYIGRTG 572
           IY  M P ++I ++  + T  IGR G
Sbjct: 21  IYTSMKPVYAICKLIGLNTLRIGRKG 46


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -3

Query: 381 ILSMSLYFLAVLPTLRKFTHITM*LQFHSICTNLSCIQLTFCMNHTPHIC 232
           IL   LY +  L  +  F      +Q   I    +C+  +  +  TP+IC
Sbjct: 276 ILESLLYMVTKLVVVT-FLKFIKKIQIFGIMITKACMSASNLIQRTPNIC 324


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 649 IYIIMSPHHSIIRVFKIYTHYIGRTG 572
           IY  M P ++I ++  + T  IGR G
Sbjct: 21  IYTSMKPVYAICKLIGLNTLRIGRKG 46


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = -3

Query: 297 SICTNLSCIQLTFCMNHTPH 238
           ++C +  C+    C +HT H
Sbjct: 63  NLCDSSPCLNGATCQDHTTH 82


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 398 ILHVH*FYQCHYTFWQCCQHCENLPT 321
           +L ++  Y  HY++WQ     +N+PT
Sbjct: 10  LLLLYYIYSKHYSYWQ----SKNVPT 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,069
Number of Sequences: 336
Number of extensions: 4406
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)