Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1445
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029097-1|ABJ17030.1|  879|Drosophila melanogaster IP13351p pro...    29   7.2  
AY069436-1|AAL39581.1|  604|Drosophila melanogaster LD14485p pro...    29   7.2  
AE013599-2473|AAF57858.1|  816|Drosophila melanogaster CG6522-PA...    29   7.2  
AE013599-1458|AAM68672.1|  879|Drosophila melanogaster CG30047-P...    29   7.2  
U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.         29   9.5  
AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p pro...    29   9.5  
AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10....    29   9.5  
AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB...    29   9.5  

>BT029097-1|ABJ17030.1|  879|Drosophila melanogaster IP13351p
           protein.
          Length = 879

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 381 ILSMSLYF-LAVLPTLRKFTHITM*LQFHSICTNLSCIQLTFCMNHTPHICM 229
           IL ++LY+ L     +    HI M L  H +  +L  I LT     TP++CM
Sbjct: 475 ILPLTLYYTLKPNDEISHPNHIHMSLHAHCVLLSLIAIILTAISLRTPYLCM 526


>AY069436-1|AAL39581.1|  604|Drosophila melanogaster LD14485p
           protein.
          Length = 604

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -3

Query: 762 KKNHSYLCQVCFARYFSESCKGCQIAV 682
           +K++  LC +C+ R F+  C+ C++A+
Sbjct: 524 EKSNMPLCLLCYDRLFAVRCQRCKVAI 550


>AE013599-2473|AAF57858.1|  816|Drosophila melanogaster CG6522-PA
           protein.
          Length = 816

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -3

Query: 762 KKNHSYLCQVCFARYFSESCKGCQIAV 682
           +K++  LC +C+ R F+  C+ C++A+
Sbjct: 736 EKSNMPLCLLCYDRLFAVRCQRCKVAI 762


>AE013599-1458|AAM68672.1|  879|Drosophila melanogaster CG30047-PA
           protein.
          Length = 879

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 381 ILSMSLYF-LAVLPTLRKFTHITM*LQFHSICTNLSCIQLTFCMNHTPHICM 229
           IL ++LY+ L     +    HI M L  H +  +L  I LT     TP++CM
Sbjct: 475 ILPLTLYYTLKPNDEISHPNHIHMSLHAHCVLLSLIAIILTAISLRTPYLCM 526


>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
          Length = 1547

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 277  LYSTNILHESYTTHLYVSRKKKNKHTRFEAMCFI 176
            L S N    S TT L   RKKK  H++ E MC I
Sbjct: 1375 LESRNSSSTSSTTDLDSGRKKKKTHSKKEIMCQI 1408


>AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p
           protein.
          Length = 1308

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 696 IPYTILRSILRNRLGTNNYDFFC 764
           IP ++ R+ILR R+ +N  D+FC
Sbjct: 540 IPKSLSRNILRERIYSNALDYFC 562


>AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.2
            protein.
          Length = 2160

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 696  IPYTILRSILRNRLGTNNYDFFC 764
            IP ++ R+ILR R+ +N  D+FC
Sbjct: 1392 IPKSLSRNILRERIYSNALDYFC 1414


>AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB
            protein.
          Length = 2178

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 696  IPYTILRSILRNRLGTNNYDFFC 764
            IP ++ R+ILR R+ +N  D+FC
Sbjct: 1410 IPKSLSRNILRERIYSNALDYFC 1432


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,658,160
Number of Sequences: 53049
Number of extensions: 689620
Number of successful extensions: 1419
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)