Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1445
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL021177-2|CAA15978.1| 192|Caenorhabditis elegans Hypothetical ... 28 6.5
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 28 8.6
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 28 8.6
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 268 TNILHESYTTHLYVSRKKKNKHTRFEAMCFISQQ*VRD 155
T+ L E + + S K K TR + CFI Q +RD
Sbjct: 1048 TDFLSEQFVDDIVSSFAKTQKWTRRQTFCFICAQILRD 1085
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 268 TNILHESYTTHLYVSRKKKNKHTRFEAMCFISQQ*VRD 155
T+ L E + + S K K TR + CFI Q +RD
Sbjct: 1174 TDFLSEQFVDDIVSSFAKTQKWTRRQTFCFICAQILRD 1211
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 268 TNILHESYTTHLYVSRKKKNKHTRFEAMCFISQQ*VRD 155
T+ L E + + S K K TR + CFI Q +RD
Sbjct: 1048 TDFLSEQFVDDIVSSFAKTQKWTRRQTFCFICAQILRD 1085
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 268 TNILHESYTTHLYVSRKKKNKHTRFEAMCFISQQ*VRD 155
T+ L E + + S K K TR + CFI Q +RD
Sbjct: 1174 TDFLSEQFVDDIVSSFAKTQKWTRRQTFCFICAQILRD 1211
>AL021177-2|CAA15978.1| 192|Caenorhabditis elegans Hypothetical
protein Y1A5A.1 protein.
Length = 192
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 756 NHSYLCQVCFARYFSESCKGC 694
NH+Y C CFA+ ++ C GC
Sbjct: 109 NHAY-CVQCFAQKYNPKCAGC 128
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 516 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 550
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 520 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 554
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 578 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 612
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 536 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 570
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 544 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 578
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 516 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 550
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 520 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 554
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 578 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 612
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 536 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 570
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 544 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 578
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 515 YCCL*MLFRNGNIDVTAKYSRTTDVMCVNLKYSYN 619
YC L + R+ +DV Y + C NL +YN
Sbjct: 506 YCDLHKILRDDLLDVLDMYPEFAETFCKNLTITYN 540
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,012,443
Number of Sequences: 27780
Number of extensions: 388386
Number of successful extensions: 972
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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