Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1441
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   2.9  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   6.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   6.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   6.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   6.8  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 254 CISFLFSVYEIKXKTNSI 307
           C+S+ F++Y +  K+N +
Sbjct: 283 CLSYCFNLYHLASKSNQL 300


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 254 CISFLFSVYEIKXKTNSI 307
           C+S+ F++Y +  K+N +
Sbjct: 283 CLSYCFNLYHLASKSNQL 300


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 354 KHLTCTYNLIEMR*NTIEFVFXLIS 280
           K L  TY LI +   T  F+F ++S
Sbjct: 227 KQLNATYGLILLLMFTSHFIFIVVS 251


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 156 NLTFKFFSLPFWSTI 112
           N    FF +PF+ST+
Sbjct: 359 NFVSTFFKIPFYSTL 373


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 170 LLCVITSLLNFFLFHFGQQFNKL 102
           +LC+ T  L  F+ HF    N +
Sbjct: 7   VLCLATLALGLFVPHFAADRNSI 29


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 141 FFSLPFWSTI 112
           FF +PF+ST+
Sbjct: 44  FFKIPFYSTL 53


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 257 ISFLFSVYEIKXKTNSIVFY 316
           I +LF+VY +    N +V Y
Sbjct: 131 IDYLFTVYLLPIIINPLVLY 150


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 141 FFSLPFWSTI 112
           FF +PF+ST+
Sbjct: 44  FFKIPFYSTL 53


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 90  HFWT*LVKLLTKMEEKKI 143
           H W+ L ++L K+E K +
Sbjct: 93  HKWSTLFEILLKLESKDL 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,864
Number of Sequences: 336
Number of extensions: 1702
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)