Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1441
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   1.3  
U23176-2|AAC46717.2|  667|Caenorhabditis elegans Patched family ...    28   1.7  
Z81089-3|CAB03137.1|  275|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z81543-2|CAB04424.1|  309|Caenorhabditis elegans Hypothetical pr...    27   4.0  
U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical pr...    27   4.0  
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    26   7.0  
AF036688-7|AAB88315.1|  128|Caenorhabditis elegans Hypothetical ...    26   7.0  
Z81047-2|CAB02828.1|  376|Caenorhabditis elegans Hypothetical pr...    26   9.3  
Z77663-18|CAC70092.2|  191|Caenorhabditis elegans Hypothetical p...    26   9.3  
Z77654-6|CAB01128.3|  191|Caenorhabditis elegans Hypothetical pr...    26   9.3  
AF022976-13|AAC69078.1|  282|Caenorhabditis elegans Hypothetical...    26   9.3  

>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
           protein ZK675.1 protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 240 VHAIIRYYYLIFINIPSAEKT*SVVMCDNLTFKFFSL 130
           +H+ IRYYY+ FI+ P+++    V  C  L   F  +
Sbjct: 883 LHSFIRYYYIPFISKPASKVAIIVGCCALLGASFIGM 919


>U23176-2|AAC46717.2|  667|Caenorhabditis elegans Patched family
           protein 2 protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 240 VHAIIRYYYLIFINIPSAEKT*SVVMCDNLTFKFFSL 130
           +H+ IRYYY+ FI+ P+++    V  C  L   F  +
Sbjct: 316 LHSFIRYYYIPFISKPASKVAIIVGCCALLGASFVGM 352


>Z81089-3|CAB03137.1|  275|Caenorhabditis elegans Hypothetical
           protein F53H4.4 protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 12/52 (23%), Positives = 22/52 (42%)
 Frame = +2

Query: 11  LTFPVQKRLDRLLCVITSLLNLFVCLPFLDLAC*IVDQNGREKNLKVRLSHI 166
           +TFP  K ++   C++     L    P  D+        G  +N+ +  +HI
Sbjct: 117 ITFPFTKDMEEPACILAEYTELLFSFPHYDIEYSFEGSYGLSRNMDLTETHI 168


>Z81543-2|CAB04424.1|  309|Caenorhabditis elegans Hypothetical
           protein F49B2.2 protein.
          Length = 309

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = -2

Query: 170 LLCVITSLLNFFLFHFGQQFNKLSPKMVDIQTNLKVRLSHITTDQVFSALGM 15
           L+C+ + LLN FL H+ Q  N   P+M  +QT++++ +    + ++F  + +
Sbjct: 223 LVCIKSHLLNEFLKHWIQGSN---PRMKYLQTSVQLEMEECKS-KIFQGINV 270


>U43375-7|AAA83624.1|  271|Caenorhabditis elegans Hypothetical
           protein K09C4.4 protein.
          Length = 271

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 53  VITSLLNLFVCLPFLDLAC*IVDQ 124
           V T +L + +CL FLD+ C I+ Q
Sbjct: 5   VTTRILYVLICLSFLDVPCEILTQ 28


>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 158 ITSLLNFFLFHFGQQFNKLSPKMVDIQTNLKVRLSHITTDQVF 30
           I +LL+  LF+FG    KL+P++  I   ++   +     +VF
Sbjct: 638 INALLSSTLFYFGNAPEKLTPQIRPIVETMQTEENDAMASEVF 680


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 158 ITSLLNFFLFHFGQQFNKLSPKMVDIQTNLKVRLSHITTDQVF 30
           I +LL+  LF+FG    KL+P++  I   ++   +     +VF
Sbjct: 638 INALLSSTLFYFGNAPEKLTPQIRPIVETMQTEENDAMASEVF 680


>AF036688-7|AAB88315.1|  128|Caenorhabditis elegans Hypothetical
           protein C24D10.2 protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 108 QAKSKNGRHTNKFKSEVITHNNRSSLFCTGNV 13
           ++K+K  R T+KF+S+        ++FC G V
Sbjct: 56  KSKTKKVRKTDKFESQNFLFRIEGTIFCAGIV 87


>Z81047-2|CAB02828.1|  376|Caenorhabditis elegans Hypothetical
           protein C41G6.3 protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 8   SLTFPVQKRLDRLLCVITSLLNLFVCLPFLDL 103
           S+TFP+ +R+ +L     +++ L +C+ F  L
Sbjct: 148 SVTFPLSQRVKKLTSAKGAVITLMLCMMFWTL 179


>Z77663-18|CAC70092.2|  191|Caenorhabditis elegans Hypothetical
           protein C50B8.5 protein.
          Length = 191

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = -2

Query: 179 LDRLLCVITSLLNFFLFHFGQQFNKLSPKMVDIQTNLKVRLSHITTDQVFSALGMLM 9
           LD+ L  +   +NF L  F Q  N +  ++ D+Q N+  +L+   ++ ++  + ML+
Sbjct: 24  LDQGLGQLVDGMNFGLGVFDQHVNMVVRQVNDVQNNVNSKLTLFPSEWLYLLVLMLI 80


>Z77654-6|CAB01128.3|  191|Caenorhabditis elegans Hypothetical
           protein C50B8.5 protein.
          Length = 191

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = -2

Query: 179 LDRLLCVITSLLNFFLFHFGQQFNKLSPKMVDIQTNLKVRLSHITTDQVFSALGMLM 9
           LD+ L  +   +NF L  F Q  N +  ++ D+Q N+  +L+   ++ ++  + ML+
Sbjct: 24  LDQGLGQLVDGMNFGLGVFDQHVNMVVRQVNDVQNNVNSKLTLFPSEWLYLLVLMLI 80


>AF022976-13|AAC69078.1|  282|Caenorhabditis elegans Hypothetical
           protein R11G11.3 protein.
          Length = 282

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +1

Query: 91  IFGLSLLNC*PKWKRKKFKSEVITHNNRSSLFCTGNVNEY*IIISYNR 234
           +F +S+LN    ++++KFK      N++  LF +   N    + +Y +
Sbjct: 230 VFTVSILNVLKNFEQEKFKKSNFEINDQKYLFTSSYFNSLIKLFAYRK 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,940,408
Number of Sequences: 27780
Number of extensions: 150361
Number of successful extensions: 314
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)