Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1431
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...    28   8.3  
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...    28   8.3  
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...    28   8.3  
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...    28   8.3  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 498 FSVFYCIKDMFFMRLRAHVDYIILLTKYM 584
           + V YC KD F +R+R H  ++I + K +
Sbjct: 75  YLVKYCGKDQFHIRMRLHPFHVIRINKML 103


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 498 FSVFYCIKDMFFMRLRAHVDYIILLTKYM 584
           + V YC KD F +R+R H  ++I + K +
Sbjct: 75  YLVKYCGKDQFHIRMRLHPFHVIRINKML 103


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 498 FSVFYCIKDMFFMRLRAHVDYIILLTKYM 584
           + V YC KD F +R+R H  ++I + K +
Sbjct: 88  YLVKYCGKDQFHIRMRLHPFHVIRINKML 116


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 498 FSVFYCIKDMFFMRLRAHVDYIILLTKYM 584
           + V YC KD F +R+R H  ++I + K +
Sbjct: 94  YLVKYCGKDQFHIRMRLHPFHVIRINKML 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,240,299
Number of Sequences: 53049
Number of extensions: 395596
Number of successful extensions: 671
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)