Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1427
         (581 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for ...    32   1.7  
M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.                    32   1.7  
BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1,...    32   1.7  
AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of compl...    32   1.7  

>X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for
           complement component C1r. ).
          Length = 705

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 248 MND*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 364
           ++D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 242 IDDHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 248 MND*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 364
           ++D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 242 IDDHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1, r
           subcomponent protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 248 MND*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 364
           ++D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 242 IDDHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of
           complement component 1 protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 248 MND*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 364
           ++D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 242 IDDHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,299,920
Number of Sequences: 237096
Number of extensions: 1792822
Number of successful extensions: 4063
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4062
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)