Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1426
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 2.7
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 4.6
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 4.6
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 8.1
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 8.1
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 29 8.1
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 29 8.1
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 29 8.1
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 29 8.1
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 29 8.1
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 8.1
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 8.1
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 29 8.1
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 29 8.1
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 29 8.1
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 29 8.1
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 29 8.1
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 31.1 bits (67), Expect = 2.7
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 19 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 153
+G S R +HD+ PS PR+ R S+D S PR PD R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 345 TPLRPKPA*PNPARICSLWSPESRE 271
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 345 TPLRPKPA*PNPARICSLWSPESRE 271
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 367 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 260
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 367 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 260
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 610 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 669
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 670 KTQEISRPN 678
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 342 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 401
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 402 KTQEISRPN 410
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 610 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 669
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 670 KTQEISRPN 678
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 342 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 401
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 402 KTQEISRPN 410
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 610 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 669
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 670 KTQEISRPN 678
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 367 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 260
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 367 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 260
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 39 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 98
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 99 KTQEISRPN 107
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 56 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 115
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 116 KTQEISRPN 124
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 56 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSLLKSNKRQREKVASDTEEADRTSSKKT 115
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 116 KTQEISRPN 124
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 610 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 669
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 670 KTQEISRPN 678
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 29.5 bits (63), Expect = 8.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 GYESPGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKT 177
G SP A S N S+ + S +E SS S R R ++ D D KKT
Sbjct: 596 GRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKT 655
Query: 178 DSIDLRDPN 204
+ ++ PN
Sbjct: 656 KTQEISRPN 664
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,481,198
Number of Sequences: 237096
Number of extensions: 1873214
Number of successful extensions: 4458
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4458
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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